Click here to switch to the map view.

The map label for this gene is yjgH [H]

Identifier: 13474042

GI number: 13474042

Start: 3839346

End: 3839744

Strand: Reverse

Name: yjgH [H]

Synonym: mll4827

Alternate gene names: 13474042

Gene position: 3839744-3839346 (Counterclockwise)

Preceding gene: 13474043

Following gene: 13474039

Centisome position: 54.57

GC content: 64.16

Gene sequence:

>399_bases
ATGACCAAGCGCGACGCAATCTTCCCTGCCGGCAGGCAGGCTCTCTATGACATCAACCGCTATTCGGCGGCGATCCGCTC
GGGAGACTTGCTGTTCGTCTCCGGCCAGGTCGGCAGCCGCGAGGACGGATCGCCCGAGCCTGTCTTCGAAAAGCAGGTCC
AGCTTGCCTTCGACAACCTCGCGGCCGTGCTGAAGGCCGCCGGCTGCACGTTCGACGATATTGTCGACGTCACCACGTTC
CACACCGATCCCGCCGCGCAGTGGCAGGCGATTGACGCCGTCCGACTGAAGGTGTTTGGGGAACCGCCCTACACGAACTG
GACCGCGGTGGGCGTGAACTGGCTGGCGGGCTTCGACTTCGAGATAAAGGTCATCGCGCGCCTTCCGCAGCCTGCCTGA

Upstream 100 bases:

>100_bases
CATATCCTACATACGGGGCGTATGTGAATCGTCCCGGACAGTGGAGCGCAGGTCGCGATCGTCGGGAGATCGGGCCTGCT
TTTGTTTGAACGGAGTGAAA

Downstream 100 bases:

>100_bases
TCGGTTGGCTGCGGGCGACGCATGAGTCGCCTCAGGGCACGATCAGCGTGCCGGCGCCGTGTTCGGTGAAGAGCTCGAGC
AGCACCGCATGCGGCGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTKRDAIFPAGRQALYDINRYSAAIRSGDLLFVSGQVGSREDGSPEPVFEKQVQLAFDNLAAVLKAAGCTFDDIVDVTTF
HTDPAAQWQAIDAVRLKVFGEPPYTNWTAVGVNWLAGFDFEIKVIARLPQPA

Sequences:

>Translated_132_residues
MTKRDAIFPAGRQALYDINRYSAAIRSGDLLFVSGQVGSREDGSPEPVFEKQVQLAFDNLAAVLKAAGCTFDDIVDVTTF
HTDPAAQWQAIDAVRLKVFGEPPYTNWTAVGVNWLAGFDFEIKVIARLPQPA
>Mature_131_residues
TKRDAIFPAGRQALYDINRYSAAIRSGDLLFVSGQVGSREDGSPEPVFEKQVQLAFDNLAAVLKAAGCTFDDIVDVTTFH
TDPAAQWQAIDAVRLKVFGEPPYTNWTAVGVNWLAGFDFEIKVIARLPQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=130, Percent_Identity=72.3076923076923, Blast_Score=202, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14474; Mature: 14343

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRDAIFPAGRQALYDINRYSAAIRSGDLLFVSGQVGSREDGSPEPVFEKQVQLAFDNL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
AAVLKAAGCTFDDIVDVTTFHTDPAAQWQAIDAVRLKVFGEPPYTNWTAVGVNWLAGFDF
HHHHHHCCCCHHHHEEEEEECCCCCCHHHHEEEEEEEEECCCCCCCEEEECEEEEECCCE
EIKVIARLPQPA
EEEEEEECCCCC
>Mature Secondary Structure 
TKRDAIFPAGRQALYDINRYSAAIRSGDLLFVSGQVGSREDGSPEPVFEKQVQLAFDNL
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
AAVLKAAGCTFDDIVDVTTFHTDPAAQWQAIDAVRLKVFGEPPYTNWTAVGVNWLAGFDF
HHHHHHCCCCHHHHEEEEEECCCCCCHHHHEEEEEEEEECCCCCCCEEEECEEEEECCCE
EIKVIARLPQPA
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]