| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is bchE [H]
Identifier: 13474043
GI number: 13474043
Start: 3839919
End: 3841454
Strand: Reverse
Name: bchE [H]
Synonym: mll4828
Alternate gene names: 13474043
Gene position: 3841454-3839919 (Counterclockwise)
Preceding gene: 13474044
Following gene: 13474042
Centisome position: 54.6
GC content: 64.65
Gene sequence:
>1536_bases ATGAAAATCGTCCTGATCAATCCGCCGCACACCGCCATCGGCAGCCGCGTGCCGGACGACCATTTGCCCCCGCTTGGCCT GCTGGCGATCGGCGGCCCGCTGATCGATGCCGGCCACGACGTACGCCTCGTCGATGCCGAGTTCGGGCCGATGCCGCTCG ACATAGTGGTGCGCGACGCCTTGGATGATTTCCCGGACTTCGTCCTGATCGGCCATTCCGGCTCGACCTCGGCGCACCCG ACCGCCTTGCTGATCGCCGAAATGATCAAACAGCGGGAGCCGGCGACGATCATCATCTATGGCGGCGTCTTCCCGACCTA TCACTGGCGCGACATCCTGACGGACACGGACGTCTTCGATTTCATCGTGCGCGGCGAGGGCGAGGCGACCGTCGTGGCGC TGGTCGAGGCGCTGGAAATGCACCAGCCGCCGGCAAGCGTCGCCGGCATCGCCTTTCGCGACGATCTGCACCGCCCCTTT GCCACGCAGGCGGCCATGACGATTGCCGAACTCGACGCCTACCGGGTCGGCTGGGAGCTGATCGACCACCGCCGCTACAG CTACTGGGGCGGCAAGCGCGCGGTGGTGATGCAGTTTTCGCGCGGCTGTCCGCATCTGTGCAACTATTGCGGCCAACGCG GCTTCTGGACTCGCTGGCGGCATCGCGATCCCAAAAAGTTCGCGCAAGAAATCGCTTGGCTGCACCGCGAACACGGCGTC GAACTGATCAACCTCGCCGACGAGAACCCCACGGTTTCGAAGAAGGCGTGGCGCGCCTTTCTCGATGCGCTGATCGCCGA AAACGTGCCGGTGCTGATCGTCGGTTCGACCCGCGCCGACGACATCGTGCGCGATGCCGACATCCTGCATCTCTACCGCA AGGCCGGTGTCATCCGATGGCTGCTCGGCATGGAAAACACCGACGAGCAGACGCTTCAGTTGATCCGCAAGGGCGGCAGC ACCTCATCCGACCGCGAGGCGATAAGGCTGCTGCGCAAGCATGGCATATTGTCGATGGCGACCTGGGTGGCCGGCTTCGA GGATGAGGGGTTTCGCGACCTGTGGCGCGGCTTCCGCCAGCTCATCGCCTACGACCCCGACCAGATCCAGGCGCTTTATG TGACGCCGCATCGCTGGACGCCGTTCTTCCGTATCGCGCGCGACCGCAAGGTCATCCAAAAAGATGCCCGGCTGTGGGAC TACAAGCACCAGGTGCTGCAGATGACACGGCTGAAGCCCTGGATGCTGTTCTTCAGCGTCAAGCTCATCGAGCTCGCCGT GCAGTCGCGGCCGAAGGCGCTGGCGCGCATCCTGTTCCACCCCGATCCCGAGCAGCGGCATTCGATGCGCTGGTACACGA AAATGGGCCGCCGCGTCTGGTTCCGCGAGGTCTGGGGATTTCTGGCTCGCGACGGCAGGGTGAAGGACGGACCGACGCTT GCCGAATTCTGGGGCACGCCACAGGACGCGGAGGAGGAATCGATGTCCGTCGCGCGACCGCCGCGCAAGCCGGCCGAAGC TGCAGTCTCGATCTAG
Upstream 100 bases:
>100_bases CATTCTTGCGGAGAAGCTGCACGCAAACTGCTGAAACGGGCCAATCGGGTGGCTAGATCGCCGTCCAGCATATGCGGACC AATCTCTCATGAGGTCCGCC
Downstream 100 bases:
>100_bases CCGGGCGCCTGACGGCTCTCGGGTCTCACAAAAATACGCGGCGTATGTGTATTGACATACGCCGCGTATGTCCCCATATC CTACATACGGGGCGTATGTG
Product: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit
Products: NA
Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKIVLINPPHTAIGSRVPDDHLPPLGLLAIGGPLIDAGHDVRLVDAEFGPMPLDIVVRDALDDFPDFVLIGHSGSTSAHP TALLIAEMIKQREPATIIIYGGVFPTYHWRDILTDTDVFDFIVRGEGEATVVALVEALEMHQPPASVAGIAFRDDLHRPF ATQAAMTIAELDAYRVGWELIDHRRYSYWGGKRAVVMQFSRGCPHLCNYCGQRGFWTRWRHRDPKKFAQEIAWLHREHGV ELINLADENPTVSKKAWRAFLDALIAENVPVLIVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTLQLIRKGGS TSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQLIAYDPDQIQALYVTPHRWTPFFRIARDRKVIQKDARLWD YKHQVLQMTRLKPWMLFFSVKLIELAVQSRPKALARILFHPDPEQRHSMRWYTKMGRRVWFREVWGFLARDGRVKDGPTL AEFWGTPQDAEEESMSVARPPRKPAEAAVSI
Sequences:
>Translated_511_residues MKIVLINPPHTAIGSRVPDDHLPPLGLLAIGGPLIDAGHDVRLVDAEFGPMPLDIVVRDALDDFPDFVLIGHSGSTSAHP TALLIAEMIKQREPATIIIYGGVFPTYHWRDILTDTDVFDFIVRGEGEATVVALVEALEMHQPPASVAGIAFRDDLHRPF ATQAAMTIAELDAYRVGWELIDHRRYSYWGGKRAVVMQFSRGCPHLCNYCGQRGFWTRWRHRDPKKFAQEIAWLHREHGV ELINLADENPTVSKKAWRAFLDALIAENVPVLIVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTLQLIRKGGS TSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQLIAYDPDQIQALYVTPHRWTPFFRIARDRKVIQKDARLWD YKHQVLQMTRLKPWMLFFSVKLIELAVQSRPKALARILFHPDPEQRHSMRWYTKMGRRVWFREVWGFLARDGRVKDGPTL AEFWGTPQDAEEESMSVARPPRKPAEAAVSI >Mature_511_residues MKIVLINPPHTAIGSRVPDDHLPPLGLLAIGGPLIDAGHDVRLVDAEFGPMPLDIVVRDALDDFPDFVLIGHSGSTSAHP TALLIAEMIKQREPATIIIYGGVFPTYHWRDILTDTDVFDFIVRGEGEATVVALVEALEMHQPPASVAGIAFRDDLHRPF ATQAAMTIAELDAYRVGWELIDHRRYSYWGGKRAVVMQFSRGCPHLCNYCGQRGFWTRWRHRDPKKFAQEIAWLHREHGV ELINLADENPTVSKKAWRAFLDALIAENVPVLIVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTLQLIRKGGS TSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQLIAYDPDQIQALYVTPHRWTPFFRIARDRKVIQKDARLWD YKHQVLQMTRLKPWMLFFSVKLIELAVQSRPKALARILFHPDPEQRHSMRWYTKMGRRVWFREVWGFLARDGRVKDGPTL AEFWGTPQDAEEESMSVARPPRKPAEAAVSI
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 58461; Mature: 58461
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVLINPPHTAIGSRVPDDHLPPLGLLAIGGPLIDAGHDVRLVDAEFGPMPLDIVVRDA CEEEEECCCCHHHCCCCCCCCCCCCCCEEECCCEECCCCCEEEEECCCCCCCHHHHHHHH LDDFPDFVLIGHSGSTSAHPTALLIAEMIKQREPATIIIYGGVFPTYHWRDILTDTDVFD HHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCHHH FIVRGEGEATVVALVEALEMHQPPASVAGIAFRDDLHRPFATQAAMTIAELDAYRVGWEL HEEECCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IDHRRYSYWGGKRAVVMQFSRGCPHLCNYCGQRGFWTRWRHRDPKKFAQEIAWLHREHGV HHCCHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCC ELINLADENPTVSKKAWRAFLDALIAENVPVLIVGSTRADDIVRDADILHLYRKAGVIRW EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLGMENTDEQTLQLIRKGGSTSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQ HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH LIAYDPDQIQALYVTPHRWTPFFRIARDRKVIQKDARLWDYKHQVLQMTRLKPWMLFFSV HHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KLIELAVQSRPKALARILFHPDPEQRHSMRWYTKMGRRVWFREVWGFLARDGRVKDGPTL HHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AEFWGTPQDAEEESMSVARPPRKPAEAAVSI HHHCCCCCCCCHHHHHCCCCCCCCHHHHCCC >Mature Secondary Structure MKIVLINPPHTAIGSRVPDDHLPPLGLLAIGGPLIDAGHDVRLVDAEFGPMPLDIVVRDA CEEEEECCCCHHHCCCCCCCCCCCCCCEEECCCEECCCCCEEEEECCCCCCCHHHHHHHH LDDFPDFVLIGHSGSTSAHPTALLIAEMIKQREPATIIIYGGVFPTYHWRDILTDTDVFD HHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCHHH FIVRGEGEATVVALVEALEMHQPPASVAGIAFRDDLHRPFATQAAMTIAELDAYRVGWEL HEEECCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IDHRRYSYWGGKRAVVMQFSRGCPHLCNYCGQRGFWTRWRHRDPKKFAQEIAWLHREHGV HHCCHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHCCC ELINLADENPTVSKKAWRAFLDALIAENVPVLIVGSTRADDIVRDADILHLYRKAGVIRW EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLGMENTDEQTLQLIRKGGSTSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQ HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH LIAYDPDQIQALYVTPHRWTPFFRIARDRKVIQKDARLWDYKHQVLQMTRLKPWMLFFSV HHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KLIELAVQSRPKALARILFHPDPEQRHSMRWYTKMGRRVWFREVWGFLARDGRVKDGPTL HHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AEFWGTPQDAEEESMSVARPPRKPAEAAVSI HHHCCCCCCCCHHHHHCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]