| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is engB
Identifier: 13474032
GI number: 13474032
Start: 3829403
End: 3830041
Strand: Direct
Name: engB
Synonym: mlr4815
Alternate gene names: 13474032
Gene position: 3829403-3830041 (Clockwise)
Preceding gene: 13474031
Following gene: 13474034
Centisome position: 54.43
GC content: 64.95
Gene sequence:
>639_bases GTGATCACCACCGACCTGTTCACGCGCGGGTGGATCTTCATCCGCGGCGTGCCGGCCATGAAGTTCCTGCCGCCGGAAGG GCCGCCGGAAATCGCCTTTGCCGGCCGCTCCAATGTCGGCAAATCGTCGCTGATCAACGCGCTGGTCAACCAGAAGGGGC TGGCGCGCACCTCCAACACGCCGGGGCGCACGCAGGAGCTCAACTATTTCGTGCCGGACGGATTTTCGGGCGAGGGCGCC GACCTGCCGCCGATGGCGCTGGTCGACATGCCGGGCTACGGCTACGCCACCGCGCCCAAGGAGAAGGTCGACGAGTGGAC CAAGCTGGTCTTCGACTATCTCAAGGGCCGGGTGACACTGAAGCGGGTCTATGTCCTGATCGACGCCCGCCACGGCATCA AGGCCAAGGACGACGAAGTGCTGTCGCTGCTCGACAAGGCGGCGGTGTCCTACCAGATCGTGCTGACCAAGACCGACAAG ATCAAGGTCGCCGGCGTGCCGCGGCTGATCGAGGAGACGCTGCAGAAGATCAAGAAGCGGCCGGCGGCGTTTCCGTTCGT CCTGGCGACGTCATCGGAAAAGGGCGAGGGACTGGAGGAATTGCAGGCCGCGATCGTGCTTGCGGCCAATGGCGGCTAG
Upstream 100 bases:
>100_bases GGCATTGGCCCGTGGACAAGATCGGCCGCAACCTCGATGCCATCAGGGGCGCCAATATCTCTCTTCTGGAGGCAGCAGCT TGAACGCTCTGAACAGCACT
Downstream 100 bases:
>100_bases GCCTTTGCCTCCAGCGCGATCATCTGGTGGCTTTCTTCCTCGGCGAGCTGTTCGGTGCCGTAGTTCTTCAGGAACATGTC GACGCCCGACCTGACGATGT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MITTDLFTRGWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGA DLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDK IKVAGVPRLIEETLQKIKKRPAAFPFVLATSSEKGEGLEELQAAIVLAANGG
Sequences:
>Translated_212_residues MITTDLFTRGWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGA DLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDK IKVAGVPRLIEETLQKIKKRPAAFPFVLATSSEKGEGLEELQAAIVLAANGG >Mature_212_residues MITTDLFTRGWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGA DLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDK IKVAGVPRLIEETLQKIKKRPAAFPFVLATSSEKGEGLEELQAAIVLAANGG
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=189, Percent_Identity=37.5661375661376, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI145693205, Length=159, Percent_Identity=42.1383647798742, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320543, Length=140, Percent_Identity=31.4285714285714, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_RHILO (Q98D85)
Other databases:
- EMBL: BA000012 - RefSeq: NP_105600.1 - ProteinModelPortal: Q98D85 - SMR: Q98D85 - GeneID: 1228261 - GenomeReviews: BA000012_GR - KEGG: mlo:mlr4815 - NMPDR: fig|266835.1.peg.3704 - HOGENOM: HBG447097 - OMA: RTQELIF - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23062; Mature: 23062
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTDLFTRGWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCC PGRTQELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTL CCCCEECEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE KRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLQKIKKR EEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEEECCEEEECCCHHHHHHHHHHHHHC PAAFPFVLATSSEKGEGLEELQAAIVLAANGG CCCCEEEEEECCCCCCCHHHHHEEEEEEECCC >Mature Secondary Structure MITTDLFTRGWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCC PGRTQELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTL CCCCEECEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE KRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLQKIKKR EEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEEECCEEEECCCHHHHHHHHHHHHHC PAAFPFVLATSSEKGEGLEELQAAIVLAANGG CCCCEEEEEECCCCCCCHHHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968