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The map label for this gene is yifB [H]

Identifier: 13473967

GI number: 13473967

Start: 3755482

End: 3756177

Strand: Reverse

Name: yifB [H]

Synonym: mll4733

Alternate gene names: 13473967

Gene position: 3756177-3755482 (Counterclockwise)

Preceding gene: 13473969

Following gene: 13473966

Centisome position: 53.38

GC content: 68.1

Gene sequence:

>696_bases
ATGGTGGCGCGGGTTCGCACGGTCGCTTTCCAGGGCATCGAGGCCGTGCCGGTCGACGTGCAGGTGATGATCGCGCCCGG
CAAGGTCGGCATGCAGATCGTTGGGCTGCCCGACAAGGCGGTGGCCGAAAGCCGCGAGCGGGTGCAGGCGGCGCTGCATG
CGTCGGGCCTGTCGATGCCGTCGAAGAAGGTGACGGTCAATCTGGCGCCGGCCGACCTGCCCAAGGAAGGCAGCCATTAC
GACCTGCCGATCGCGCTTGGCCTGATGGCAGCGCTTGGCGCCATTCCGGGCGACATGCTGGCCGGCTATGTCGTGCTTGG
CGAGCTTTCGCTAGACGGCACGATCGCCGCCGTCGCGGGCGCCCTGCCGGCGGCGATCGGCGCCAATGCCGAGGGCAAGG
GCCTGATCTGCCCGTTCGCCTGCGGGCCGGAGGCGGCTTGGGCCGGTAAGGACTTCGACATTTTGGCACCGCGCAGCCTG
ATCGCCATTGCCAATCATTTCCGCGGCACGCAGGTGCTGTCGCGGCCGGAGGCCGGCATCCATGCCGCGGCGCGCGACCT
GCCCGACCTTGCCGACATCAAGGGCCAGGAGACGGCCAAGCGGGCGCTGGAAGTGGCGGAGGCCGGCGGCCACAATCTGC
TAACATTGTGGCTAATTAAACGACAGTCGGCCATCGCGGCGAAACCCGCCCATTAA

Upstream 100 bases:

>100_bases
CGTAATGTTCTTGATTTGACCAGCAATCTGTGATTGTCTTCTGCGGGGGCCACATTCTAGGCCAATCGCATGGGTTGCGG
CCCATATCCGGGGTGGGACA

Downstream 100 bases:

>100_bases
GCGGTCTAACTTCGTTCCGGAACGCCCGCAACGGGCCGGGAGAGGACTGTCCGCTTTCGGGAAACATTTGGCCGAAGCAG
ACGTTCCCGCGTCCCCTGCT

Product: Mg(2+) chelatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MVARVRTVAFQGIEAVPVDVQVMIAPGKVGMQIVGLPDKAVAESRERVQAALHASGLSMPSKKVTVNLAPADLPKEGSHY
DLPIALGLMAALGAIPGDMLAGYVVLGELSLDGTIAAVAGALPAAIGANAEGKGLICPFACGPEAAWAGKDFDILAPRSL
IAIANHFRGTQVLSRPEAGIHAAARDLPDLADIKGQETAKRALEVAEAGGHNLLTLWLIKRQSAIAAKPAH

Sequences:

>Translated_231_residues
MVARVRTVAFQGIEAVPVDVQVMIAPGKVGMQIVGLPDKAVAESRERVQAALHASGLSMPSKKVTVNLAPADLPKEGSHY
DLPIALGLMAALGAIPGDMLAGYVVLGELSLDGTIAAVAGALPAAIGANAEGKGLICPFACGPEAAWAGKDFDILAPRSL
IAIANHFRGTQVLSRPEAGIHAAARDLPDLADIKGQETAKRALEVAEAGGHNLLTLWLIKRQSAIAAKPAH
>Mature_231_residues
MVARVRTVAFQGIEAVPVDVQVMIAPGKVGMQIVGLPDKAVAESRERVQAALHASGLSMPSKKVTVNLAPADLPKEGSHY
DLPIALGLMAALGAIPGDMLAGYVVLGELSLDGTIAAVAGALPAAIGANAEGKGLICPFACGPEAAWAGKDFDILAPRSL
IAIANHFRGTQVLSRPEAGIHAAARDLPDLADIKGQETAKRALEVAEAGGHNLLTLWLIKRQSAIAAKPAH

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=213, Percent_Identity=41.7840375586854, Blast_Score=146, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 23731; Mature: 23731

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARVRTVAFQGIEAVPVDVQVMIAPGKVGMQIVGLPDKAVAESRERVQAALHASGLSMP
CCCEEEEHHHCCCEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
SKKVTVNLAPADLPKEGSHYDLPIALGLMAALGAIPGDMLAGYVVLGELSLDGTIAAVAG
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCHHHHHHH
ALPAAIGANAEGKGLICPFACGPEAAWAGKDFDILAPRSLIAIANHFRGTQVLSRPEAGI
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHHCCCCCCH
HAAARDLPDLADIKGQETAKRALEVAEAGGHNLLTLWLIKRQSAIAAKPAH
HHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MVARVRTVAFQGIEAVPVDVQVMIAPGKVGMQIVGLPDKAVAESRERVQAALHASGLSMP
CCCEEEEHHHCCCEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
SKKVTVNLAPADLPKEGSHYDLPIALGLMAALGAIPGDMLAGYVVLGELSLDGTIAAVAG
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCHHHHHHH
ALPAAIGANAEGKGLICPFACGPEAAWAGKDFDILAPRSLIAIANHFRGTQVLSRPEAGI
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHHCCCCCCH
HAAARDLPDLADIKGQETAKRALEVAEAGGHNLLTLWLIKRQSAIAAKPAH
HHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]