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The map label for this gene is atpC

Identifier: 13473455

GI number: 13473455

Start: 3244942

End: 3245349

Strand: Reverse

Name: atpC

Synonym: mll4059

Alternate gene names: 13473455

Gene position: 3245349-3244942 (Counterclockwise)

Preceding gene: 13473456

Following gene: 13473453

Centisome position: 46.12

GC content: 65.2

Gene sequence:

>408_bases
ATGGCTGAAGCTTTCAAATTCGAACTGGTCTCGCCGGAGCGCCTGCTGGTTTCCGAGCAGGTCGAATCCGTCGTCATCCC
CGGCGCCGAAGGCGAGATGACCGTGATGGCGCATCACGCGCCGGTCATGACCACGATCAAGCCGGGTGTCGTCACGGTGA
AGACCGCCTCGGGCGGCGAAGAGCGCTATGTCGTGTTCGGCGGTTTCGCCGACATCGTTCCAGCCGGCTGCACCCTGCTG
GCGGAATCGGCTGTCGCCGTGAAGGATGTCGACCGGGCCGATCTCGCCCGCCGCATCCAGGAAGCCAAGGAAGATGCCGC
CGACGCCAAGGACGACCAGGCGCGCAGCAAGGCCGAGCAGTTCCTCAGCCAGCTGACCACGCTGGAAGGCGCAATTCTGC
CGGCCTGA

Upstream 100 bases:

>100_bases
AGAAGCGAATAGCGAATAGGGAGTAGCGAATAGGGCAAGGTGAGCCAAGCGAGTTTCTTCCCTACTCGCTACTCACTATT
CCCTACTCGCTAGAGTGATC

Downstream 100 bases:

>100_bases
AATCCGCACCAGATGACTTGATGAAAAGCGGGGCCTTGCCCCGCTTTTTTGTTTAAATGCCCAAGGCGGCGAAGGCCAAT
GTCGGACCATCGCGCCGCAA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAEAFKFELVSPERLLVSEQVESVVIPGAEGEMTVMAHHAPVMTTIKPGVVTVKTASGGEERYVVFGGFADIVPAGCTLL
AESAVAVKDVDRADLARRIQEAKEDAADAKDDQARSKAEQFLSQLTTLEGAILPA

Sequences:

>Translated_135_residues
MAEAFKFELVSPERLLVSEQVESVVIPGAEGEMTVMAHHAPVMTTIKPGVVTVKTASGGEERYVVFGGFADIVPAGCTLL
AESAVAVKDVDRADLARRIQEAKEDAADAKDDQARSKAEQFLSQLTTLEGAILPA
>Mature_134_residues
AEAFKFELVSPERLLVSEQVESVVIPGAEGEMTVMAHHAPVMTTIKPGVVTVKTASGGEERYVVFGGFADIVPAGCTLLA
ESAVAVKDVDRADLARRIQEAKEDAADAKDDQARSKAEQFLSQLTTLEGAILPA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=133, Percent_Identity=33.0827067669173, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_RHILO (Q98EV9)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105022.1
- ProteinModelPortal:   Q98EV9
- SMR:   Q98EV9
- GeneID:   1227683
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll4059
- NMPDR:   fig|266835.1.peg.3126
- HOGENOM:   HBG663981
- OMA:   MAMTVHC
- ProtClustDB:   PRK00571
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14313; Mature: 14182

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAFKFELVSPERLLVSEQVESVVIPGAEGEMTVMAHHAPVMTTIKPGVVTVKTASGGE
CCCCEEEEECCCHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCC
ERYVVFGGFADIVPAGCTLLAESAVAVKDVDRADLARRIQEAKEDAADAKDDQARSKAEQ
EEEEEECCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLSQLTTLEGAILPA
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEAFKFELVSPERLLVSEQVESVVIPGAEGEMTVMAHHAPVMTTIKPGVVTVKTASGGE
CCCEEEEECCCHHHHHHHHHHEEECCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCC
ERYVVFGGFADIVPAGCTLLAESAVAVKDVDRADLARRIQEAKEDAADAKDDQARSKAEQ
EEEEEECCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLSQLTTLEGAILPA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968