| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473386
Identifier: 13473386
GI number: 13473386
Start: 3171031
End: 3171291
Strand: Reverse
Name: 13473386
Synonym: mll3968
Alternate gene names: NA
Gene position: 3171291-3171031 (Counterclockwise)
Preceding gene: 13473387
Following gene: 13473385
Centisome position: 45.07
GC content: 61.3
Gene sequence:
>261_bases ATGGCCGACGATATCACCGAGACCAGCCAGACTGTTGCCGCCGGCCAGCTGCGTGCCCTCATCGAACGCATCGAGCGGCT CGAGGAAGAAAAGAAGACGATCGCCGACGACATCAAGGAAGTGTTCGCCGAGGCCAAGGGCACCGGTTTCGACACCAAGG CGATACGCACCATCATCCGCCTGCGCAAGAAGGACCAGGCCGAGCGCCAGGAAGAGGATGCCATCCTCGATCTGTACATG GCCGCGCTCGGCATGGTGTAA
Upstream 100 bases:
>100_bases TAACAGCTTGACCCGCCGCCGCCGGTCGGGCATCGAACCGGCTCAAATTTGCCGCCGTCTTTCGCCGAGTCGCGGCCCAG AACCAATTTTGGAGAAAAAC
Downstream 100 bases:
>100_bases GAGACTGTCTGGAAATTCTACTCCGCCGGCCATCTGATGGCGTTTTCTGCGCTTCCCCGTTCTACTGCGGCAGCGCAGTA GAACTGAGCTCACGGACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYM AALGMV
Sequences:
>Translated_86_residues MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYM AALGMV >Mature_85_residues ADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYMA ALGMV
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3968_RHILO (Q98F28)
Other databases:
- EMBL: BA000012 - RefSeq: NP_104953.1 - GeneID: 1227614 - GenomeReviews: BA000012_GR - KEGG: mlo:mll3968 - NMPDR: fig|266835.1.peg.3057 - HOGENOM: HBG661468 - OMA: NGYDVKA - ProtClustDB: PRK13694 - HAMAP: MF_00797 - InterPro: IPR018753
Pfam domain/function: PF10073 DUF2312
EC number: NA
Molecular weight: Translated: 9697; Mature: 9566
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LRKKDQAERQEEDAILDLYMAALGMV HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LRKKDQAERQEEDAILDLYMAALGMV HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968