| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473385
Identifier: 13473385
GI number: 13473385
Start: 3170371
End: 3170826
Strand: Reverse
Name: 13473385
Synonym: mll3967
Alternate gene names: NA
Gene position: 3170826-3170371 (Counterclockwise)
Preceding gene: 13473386
Following gene: 13473383
Centisome position: 45.07
GC content: 63.82
Gene sequence:
>456_bases ATGAGCGAATTCGACTTCGGCGGACGCCGCGCCTCGGAATTCCGCCATCGCGGCTTCTGGTCGCTGTTCGCCGAGCGGCA TCCGGAAGAAAGGGCACGGCTGGTGCGGCGCGGGCCCTGGTTCTGGCAGCGCGGGCTGCCTGACTTCGCCCTGGTCATTT CCATGTATGTCGCGCCGGCGCAGAACCATGTCGGCGTCTTTTTTGGCCGCAACGAGAAGTTCGGCGCCACCCAAAGCTGG TCGCGGTTGAAGCCGTTCCAGCCGGCGATCGAAGGGAGGCTGAAGCTCAGGCCGGAACAAAGCTGCGAGGGCCTCGGCAT CAATTCGATGTGGCGGGTCAACTGCTTTGCCGAGGACAATTGGCCCGCCATGACTGACTGGCTGGTGACGGAATGCTCGC GCGTCGAGCGCGCTGTTGTCGCGGTGCTCGGAAACGAATCCCTGCCTCAAGTCTGA
Upstream 100 bases:
>100_bases TCCGCTCCGCTCCGGTTCTCGAAACCACCACCATATGGCTCGCCGGAGCGAATTTCGAAACAGTCTCGGCCGAGTGTGAT GCTGGAGAGAGCATCGAACC
Downstream 100 bases:
>100_bases CCGCCTCGTCACAGAGGGCGGCCCCGGATTCAGTTCGGCAACGGCTCACCCCTGCCGATGTCGTCCAAATGTTGCTGCAG GGCCAGATGATCGAGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSEFDFGGRRASEFRHRGFWSLFAERHPEERARLVRRGPWFWQRGLPDFALVISMYVAPAQNHVGVFFGRNEKFGATQSW SRLKPFQPAIEGRLKLRPEQSCEGLGINSMWRVNCFAEDNWPAMTDWLVTECSRVERAVVAVLGNESLPQV
Sequences:
>Translated_151_residues MSEFDFGGRRASEFRHRGFWSLFAERHPEERARLVRRGPWFWQRGLPDFALVISMYVAPAQNHVGVFFGRNEKFGATQSW SRLKPFQPAIEGRLKLRPEQSCEGLGINSMWRVNCFAEDNWPAMTDWLVTECSRVERAVVAVLGNESLPQV >Mature_150_residues SEFDFGGRRASEFRHRGFWSLFAERHPEERARLVRRGPWFWQRGLPDFALVISMYVAPAQNHVGVFFGRNEKFGATQSWS RLKPFQPAIEGRLKLRPEQSCEGLGINSMWRVNCFAEDNWPAMTDWLVTECSRVERAVVAVLGNESLPQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17488; Mature: 17357
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFDFGGRRASEFRHRGFWSLFAERHPEERARLVRRGPWFWQRGLPDFALVISMYVAPA CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCC QNHVGVFFGRNEKFGATQSWSRLKPFQPAIEGRLKLRPEQSCEGLGINSMWRVNCFAEDN CCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCC WPAMTDWLVTECSRVERAVVAVLGNESLPQV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEFDFGGRRASEFRHRGFWSLFAERHPEERARLVRRGPWFWQRGLPDFALVISMYVAPA CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCC QNHVGVFFGRNEKFGATQSWSRLKPFQPAIEGRLKLRPEQSCEGLGINSMWRVNCFAEDN CCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCC WPAMTDWLVTECSRVERAVVAVLGNESLPQV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA