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The map label for this gene is ulaR [H]

Identifier: 13473108

GI number: 13473108

Start: 2904308

End: 2905111

Strand: Reverse

Name: ulaR [H]

Synonym: mll3600

Alternate gene names: 13473108

Gene position: 2905111-2904308 (Counterclockwise)

Preceding gene: 13473112

Following gene: 13473107

Centisome position: 41.29

GC content: 66.17

Gene sequence:

>804_bases
ATGGCACTTGGGAGGAATGAGTTGAGCGATTCCGGCCGCCAGCGTCAGATCGTCGAACTGCTGCGGGACCGCCCGTTCGC
CTCGGTGCGCGAGCTGCAGGAGCGGCTTGGCGTTTCGGCGGCGACGGTCAGGCGCGACATCGACCGGATCGACGAGGCCG
GCGAGGCGCGCAAGGTCTATGGCGGTATCTCCGCGCTCGACGGCGCATCGCATGCGGGCGTGGCCTATGCGCGGCCCTAT
GACGAGAACCGTGACCTCGCGGTCGAGGCCAAGCGGCAGATCGCGGCGATCGCGGCGACCATGGTGCGCGATGGCGACGC
CGTCATCGTCCATGGCGGCTCGACCTGCTTCCATCTCGGCGTCAAGCTCGCTGAGCGCAACATCCGCCTCTACACCAATT
CGATGCCGCTGGCGGCCTATCTCAGCGACCATGGCTATTGCAGCCTGACGGTTGCCGGCGGCGAGCTCCATCGCGAACCC
GGCATTATCCATTCGCTGACCCAGGCCACGCCCTTCTACGCCTCGAAATTCTTTCTCGGCGCGCAGGGCCTCAACCAGGA
AGGCGTGCTGGAATCGCATCCGCTGCTGGTGCGCTCCATTGTCGATCTCAGCCTCTGCGCCGACCAGATCGTGGTGCTGG
CCGACAGCCGCAAACTGTCGATCCACGCGCGCAATGTCGCTCTGCCGCTGTCGCGCATCGGCACGCTGATCACCGACGAC
GGTCTTTCCGATGCCGATGCGCGCATGCTGGAAGATGCCGGCGTCATGGTGCGGATCGCGTCCACCTCGGGAGCCGTCCC
GTGA

Upstream 100 bases:

>100_bases
TCGCAGATGCGAGCGACTTACGTCAACAGTGATCTACTATCATCAAAACTAGCTTGCAATCTGACTAATGTTGAGTAAGT
TGCACCAACTGCCGTGGAAA

Downstream 100 bases:

>100_bases
AAGTGGCGGTACTCGATTTCGGCAAGACCAATTCGAAGCTGTTCGTCTTCGGCCAGGATGGAGGCATCCTTGACGAACGC
CGGACCCAGCCGAAATGGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MALGRNELSDSGRQRQIVELLRDRPFASVRELQERLGVSAATVRRDIDRIDEAGEARKVYGGISALDGASHAGVAYARPY
DENRDLAVEAKRQIAAIAATMVRDGDAVIVHGGSTCFHLGVKLAERNIRLYTNSMPLAAYLSDHGYCSLTVAGGELHREP
GIIHSLTQATPFYASKFFLGAQGLNQEGVLESHPLLVRSIVDLSLCADQIVVLADSRKLSIHARNVALPLSRIGTLITDD
GLSDADARMLEDAGVMVRIASTSGAVP

Sequences:

>Translated_267_residues
MALGRNELSDSGRQRQIVELLRDRPFASVRELQERLGVSAATVRRDIDRIDEAGEARKVYGGISALDGASHAGVAYARPY
DENRDLAVEAKRQIAAIAATMVRDGDAVIVHGGSTCFHLGVKLAERNIRLYTNSMPLAAYLSDHGYCSLTVAGGELHREP
GIIHSLTQATPFYASKFFLGAQGLNQEGVLESHPLLVRSIVDLSLCADQIVVLADSRKLSIHARNVALPLSRIGTLITDD
GLSDADARMLEDAGVMVRIASTSGAVP
>Mature_266_residues
ALGRNELSDSGRQRQIVELLRDRPFASVRELQERLGVSAATVRRDIDRIDEAGEARKVYGGISALDGASHAGVAYARPYD
ENRDLAVEAKRQIAAIAATMVRDGDAVIVHGGSTCFHLGVKLAERNIRLYTNSMPLAAYLSDHGYCSLTVAGGELHREPG
IIHSLTQATPFYASKFFLGAQGLNQEGVLESHPLLVRSIVDLSLCADQIVVLADSRKLSIHARNVALPLSRIGTLITDDG
LSDADARMLEDAGVMVRIASTSGAVP

Specific function: Represses ulaG and the ulaABCDEF operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790635, Length=252, Percent_Identity=29.3650793650794, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789059, Length=263, Percent_Identity=28.5171102661597, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI226510968, Length=245, Percent_Identity=28.1632653061224, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790753, Length=252, Percent_Identity=26.984126984127, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787540, Length=257, Percent_Identity=24.9027237354086, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789519, Length=257, Percent_Identity=26.4591439688716, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789170, Length=183, Percent_Identity=25.1366120218579, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789829, Length=190, Percent_Identity=28.4210526315789, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87082344, Length=256, Percent_Identity=25.390625, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 28685; Mature: 28554

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGRNELSDSGRQRQIVELLRDRPFASVRELQERLGVSAATVRRDIDRIDEAGEARKVY
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
GGISALDGASHAGVAYARPYDENRDLAVEAKRQIAAIAATMVRDGDAVIVHGGSTCFHLG
CCHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHH
VKLAERNIRLYTNSMPLAAYLSDHGYCSLTVAGGELHREPGIIHSLTQATPFYASKFFLG
HHHHCCCEEEEECCCCEEEEECCCCEEEEEEECCHHCCCCCHHHHHHHCCCHHHHHHEEC
AQGLNQEGVLESHPLLVRSIVDLSLCADQIVVLADSRKLSIHARNVALPLSRIGTLITDD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCEECCHHHHCCEEECC
GLSDADARMLEDAGVMVRIASTSGAVP
CCCHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ALGRNELSDSGRQRQIVELLRDRPFASVRELQERLGVSAATVRRDIDRIDEAGEARKVY
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
GGISALDGASHAGVAYARPYDENRDLAVEAKRQIAAIAATMVRDGDAVIVHGGSTCFHLG
CCHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHH
VKLAERNIRLYTNSMPLAAYLSDHGYCSLTVAGGELHREPGIIHSLTQATPFYASKFFLG
HHHHCCCEEEEECCCCEEEEECCCCEEEEEEECCHHCCCCCHHHHHHHCCCHHHHHHEEC
AQGLNQEGVLESHPLLVRSIVDLSLCADQIVVLADSRKLSIHARNVALPLSRIGTLITDD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCEECCHHHHCCEEECC
GLSDADARMLEDAGVMVRIASTSGAVP
CCCHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA