| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473107
Identifier: 13473107
GI number: 13473107
Start: 2902932
End: 2904311
Strand: Reverse
Name: 13473107
Synonym: mll3599
Alternate gene names: NA
Gene position: 2904311-2902932 (Counterclockwise)
Preceding gene: 13473108
Following gene: 13473106
Centisome position: 41.28
GC content: 67.97
Gene sequence:
>1380_bases GTGAAAGTGGCGGTACTCGATTTCGGCAAGACCAATTCGAAGCTGTTCGTCTTCGGCCAGGATGGAGGCATCCTTGACGA ACGCCGGACCCAGCCGAAATGGACGCACCAGGACGGCTTCAGCGTGCTTGACGAGGCCGCCCTCCATGACTGGGCGCTCG GTGCCGTCACGGAGGCGGTCGAAAACCATGGCGTGGAAGGGGTGATGGTGTCGGGCCATGGCTGTACCTTTGCCCTTGTG GACGACGCGGCGCTGACGCATCCGATCCTCGACTACGAGCAGGAGCCGCCGGCCGAAATCGCTGCCCGGATCGATCACCG CATCCCGGATTTCGCCGAGACGTTCTCGCCCCGTCTGCCGCTTGGCTTCAACTATGGTCGACACATGCTGTGGGTCCAGG AGGTCGATCCCGATGCGTTCGCGGCGGCGAAATCGATCCTCGGCTACCCCCAATACTGGAGCTGGCGTCTCGGCGGCAGG CCGGTCTCAGAGGTGTCCTATCTCGGCTGCCATTCGCATTTGTGGGCGCCGCGCAGCCAAGACTTTTCATCATTGGTCGA TGCCGAGGGGTGGCGCGGCCAGATGCCGGCCTTCGCACGCGCCGGCGCGGTCATCGGCGAACGGCGTCTCGGGAGCAGCT CGCGGCCGATCGCCATCCACAATGGCGTCCACGACTCCAATGCTGCGCTCCATGCCTATCGCCGCCAGGAGCTTGGCCCG CTGACTGTGGTGTCGACCGGCACCTGGGTCGTCGTGCTCAATCCCGGCTGCCCGCTGGACGTGCTCGACCGTGACCGCGA CATGCTGGTCAATGTCGATGTCGACGGCGGCCCGGTGCCGACCATCCGCTTCATGGGCGGGCGCGAATTCGCCGCCATCA GCGCCGGCTGGCAAGGCGCGATCCCGCCTGGCGCGGTCCAGCAAGCGATCGATGCCGGCATCATGGCGCTGCCGAGCTTC GCGCCGGGCGGGCCGATGCCGGACCGCCCCGGCCGGCTGGTCGGGCGCACGCCCTATGCCGCAGAACGCGCCGCGGCGGC GCTGCTCTATGTGGCACTGATGGTCGATCTCTGCCTTGACCTCATCCAGTCTCAAGACACCGTCATCGTCGATGGCGGGC TGAACGCTGGCGGCCTGCTTGCCGGACTGCTGGCTGAGCTGCGTCCCGGCCAGGCCTTCCTGCAGGGCGCCACGCTGGAG GGCAGCGCCACGGGCGCGGCAGCACTAGCCTTCGAGAGCGTCGGGCGCGACTTCGTCGCCGAGGCGCCGGAGCCGGTGCA TGCGGCACGCTTCGCCGGCCTTGCCGGCTATCGCGACGCCTGGCGCGATCGCGTTGGCGGGCAGGGCACCGCCATCAAGG CGGCGGGTGGTGCACGATGA
Upstream 100 bases:
>100_bases GCACGCTGATCACCGACGACGGTCTTTCCGATGCCGATGCGCGCATGCTGGAAGATGCCGGCGTCATGGTGCGGATCGCG TCCACCTCGGGAGCCGTCCC
Downstream 100 bases:
>100_bases GCGCGACGGCGCAGAAACAGGCAAGCAGCCATCCGGTGCTGGAGATGCGGCACATCTCCAAGACCTTCGGTGCGATCCGC GCCTTGCATGATGTTTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Carbohydrate Kinase Protein; Carbohydrate Kinase Fggy; Carbohydrate Kinase; Sugar Kinase; L-Fuculokinase; Sugar Kinase-Like Protein; Carbohydrate Kinases; Sugar Kinase Protein; Carbohydrate Kinase Fggy-Like Protein; Carbohydrate Kinase Contains FGGY Family Domain; L-Xylulose Kinase Involved In Competition For Nodulation
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKVAVLDFGKTNSKLFVFGQDGGILDERRTQPKWTHQDGFSVLDEAALHDWALGAVTEAVENHGVEGVMVSGHGCTFALV DDAALTHPILDYEQEPPAEIAARIDHRIPDFAETFSPRLPLGFNYGRHMLWVQEVDPDAFAAAKSILGYPQYWSWRLGGR PVSEVSYLGCHSHLWAPRSQDFSSLVDAEGWRGQMPAFARAGAVIGERRLGSSSRPIAIHNGVHDSNAALHAYRRQELGP LTVVSTGTWVVVLNPGCPLDVLDRDRDMLVNVDVDGGPVPTIRFMGGREFAAISAGWQGAIPPGAVQQAIDAGIMALPSF APGGPMPDRPGRLVGRTPYAAERAAAALLYVALMVDLCLDLIQSQDTVIVDGGLNAGGLLAGLLAELRPGQAFLQGATLE GSATGAAALAFESVGRDFVAEAPEPVHAARFAGLAGYRDAWRDRVGGQGTAIKAAGGAR
Sequences:
>Translated_459_residues MKVAVLDFGKTNSKLFVFGQDGGILDERRTQPKWTHQDGFSVLDEAALHDWALGAVTEAVENHGVEGVMVSGHGCTFALV DDAALTHPILDYEQEPPAEIAARIDHRIPDFAETFSPRLPLGFNYGRHMLWVQEVDPDAFAAAKSILGYPQYWSWRLGGR PVSEVSYLGCHSHLWAPRSQDFSSLVDAEGWRGQMPAFARAGAVIGERRLGSSSRPIAIHNGVHDSNAALHAYRRQELGP LTVVSTGTWVVVLNPGCPLDVLDRDRDMLVNVDVDGGPVPTIRFMGGREFAAISAGWQGAIPPGAVQQAIDAGIMALPSF APGGPMPDRPGRLVGRTPYAAERAAAALLYVALMVDLCLDLIQSQDTVIVDGGLNAGGLLAGLLAELRPGQAFLQGATLE GSATGAAALAFESVGRDFVAEAPEPVHAARFAGLAGYRDAWRDRVGGQGTAIKAAGGAR >Mature_459_residues MKVAVLDFGKTNSKLFVFGQDGGILDERRTQPKWTHQDGFSVLDEAALHDWALGAVTEAVENHGVEGVMVSGHGCTFALV DDAALTHPILDYEQEPPAEIAARIDHRIPDFAETFSPRLPLGFNYGRHMLWVQEVDPDAFAAAKSILGYPQYWSWRLGGR PVSEVSYLGCHSHLWAPRSQDFSSLVDAEGWRGQMPAFARAGAVIGERRLGSSSRPIAIHNGVHDSNAALHAYRRQELGP LTVVSTGTWVVVLNPGCPLDVLDRDRDMLVNVDVDGGPVPTIRFMGGREFAAISAGWQGAIPPGAVQQAIDAGIMALPSF APGGPMPDRPGRLVGRTPYAAERAAAALLYVALMVDLCLDLIQSQDTVIVDGGLNAGGLLAGLLAELRPGQAFLQGATLE GSATGAAALAFESVGRDFVAEAPEPVHAARFAGLAGYRDAWRDRVGGQGTAIKAAGGAR
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48793; Mature: 48793
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAVLDFGKTNSKLFVFGQDGGILDERRTQPKWTHQDGFSVLDEAALHDWALGAVTEAV CEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ENHGVEGVMVSGHGCTFALVDDAALTHPILDYEQEPPAEIAARIDHRIPDFAETFSPRLP HHCCCCEEEEECCCEEEEEECCCHHHCHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCCCC LGFNYGRHMLWVQEVDPDAFAAAKSILGYPQYWSWRLGGRPVSEVSYLGCHSHLWAPRSQ CCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCHHHHCCCCCCC DFSSLVDAEGWRGQMPAFARAGAVIGERRLGSSSRPIAIHNGVHDSNAALHAYRRQELGP CHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCC LTVVSTGTWVVVLNPGCPLDVLDRDRDMLVNVDVDGGPVPTIRFMGGREFAAISAGWQGA EEEEECCEEEEEECCCCCHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCC IPPGAVQQAIDAGIMALPSFAPGGPMPDRPGRLVGRTPYAAERAAAALLYVALMVDLCLD CCHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH LIQSQDTVIVDGGLNAGGLLAGLLAELRPGQAFLQGATLEGSATGAAALAFESVGRDFVA HHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCHHHH EAPEPVHAARFAGLAGYRDAWRDRVGGQGTAIKAAGGAR CCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCC >Mature Secondary Structure MKVAVLDFGKTNSKLFVFGQDGGILDERRTQPKWTHQDGFSVLDEAALHDWALGAVTEAV CEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ENHGVEGVMVSGHGCTFALVDDAALTHPILDYEQEPPAEIAARIDHRIPDFAETFSPRLP HHCCCCEEEEECCCEEEEEECCCHHHCHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCCCC LGFNYGRHMLWVQEVDPDAFAAAKSILGYPQYWSWRLGGRPVSEVSYLGCHSHLWAPRSQ CCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCHHHHCCCCCCC DFSSLVDAEGWRGQMPAFARAGAVIGERRLGSSSRPIAIHNGVHDSNAALHAYRRQELGP CHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCC LTVVSTGTWVVVLNPGCPLDVLDRDRDMLVNVDVDGGPVPTIRFMGGREFAAISAGWQGA EEEEECCEEEEEECCCCCHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCC IPPGAVQQAIDAGIMALPSFAPGGPMPDRPGRLVGRTPYAAERAAAALLYVALMVDLCLD CCHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH LIQSQDTVIVDGGLNAGGLLAGLLAELRPGQAFLQGATLEGSATGAAALAFESVGRDFVA HHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCHHHH EAPEPVHAARFAGLAGYRDAWRDRVGGQGTAIKAAGGAR CCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA