| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473057
Identifier: 13473057
GI number: 13473057
Start: 2856161
End: 2856544
Strand: Reverse
Name: 13473057
Synonym: mll3541
Alternate gene names: NA
Gene position: 2856544-2856161 (Counterclockwise)
Preceding gene: 13473058
Following gene: 13473056
Centisome position: 40.6
GC content: 58.59
Gene sequence:
>384_bases GTGTTCCGGCAGATTGCCCTTGCGAGGCCGGTTGGTAGGTCTCGATGCAAAGGGAGTTACGTCATGACCGCTTACGCAAT CGCCCATATGCGCCAAGTCACGATGGGTCCGCAGATCGTCGAGTACCTGCACAAGATCGATGCCACGCTGGAGCCTTTCG GCGGCCGTTTCCTGGTCCATGGCGGCGATGTTGAGGTGATCGAGAACGACTGGCCGGGCAACCTCATCGTCATCGAATTT CCCGACCGGCGGCATGTGCGCGAGTGGTATGATTCGCCCGCCTATCAGGCGATCCTTTCACTGCGCACCGATAATTCGGA CTCTGACGTAATCATCGTTGACGGCGTCGAGCATCCGCACAAGGCTACCGATGTGCTTGGCTGA
Upstream 100 bases:
>100_bases TACTTTCCGGAACTCGACCGGTGAACTTGCGCAAGAGCGCTTGCGGCCGGCCGTCGAAGGCGCCGATTCCATTACCTCGG GCGTAATCGCTTTGCGTCAG
Downstream 100 bases:
>100_bases TGGAGCTGCCCATGCGGACGATTCGTGGCGATCTGTTGCAACTTGCGCTCGACGGAGAGTTCGACGCGATCGTGCATGGC TGCAATTGCCAATGCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG
Sequences:
>Translated_127_residues MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG >Mature_127_residues MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14346; Mature: 14346
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEE GGDVEVIENDWPGNLIVIEFPDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPH CCCEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCC KATDVLG CHHCCCC >Mature Secondary Structure MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEE GGDVEVIENDWPGNLIVIEFPDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPH CCCEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCC KATDVLG CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA