Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473057

Identifier: 13473057

GI number: 13473057

Start: 2856161

End: 2856544

Strand: Reverse

Name: 13473057

Synonym: mll3541

Alternate gene names: NA

Gene position: 2856544-2856161 (Counterclockwise)

Preceding gene: 13473058

Following gene: 13473056

Centisome position: 40.6

GC content: 58.59

Gene sequence:

>384_bases
GTGTTCCGGCAGATTGCCCTTGCGAGGCCGGTTGGTAGGTCTCGATGCAAAGGGAGTTACGTCATGACCGCTTACGCAAT
CGCCCATATGCGCCAAGTCACGATGGGTCCGCAGATCGTCGAGTACCTGCACAAGATCGATGCCACGCTGGAGCCTTTCG
GCGGCCGTTTCCTGGTCCATGGCGGCGATGTTGAGGTGATCGAGAACGACTGGCCGGGCAACCTCATCGTCATCGAATTT
CCCGACCGGCGGCATGTGCGCGAGTGGTATGATTCGCCCGCCTATCAGGCGATCCTTTCACTGCGCACCGATAATTCGGA
CTCTGACGTAATCATCGTTGACGGCGTCGAGCATCCGCACAAGGCTACCGATGTGCTTGGCTGA

Upstream 100 bases:

>100_bases
TACTTTCCGGAACTCGACCGGTGAACTTGCGCAAGAGCGCTTGCGGCCGGCCGTCGAAGGCGCCGATTCCATTACCTCGG
GCGTAATCGCTTTGCGTCAG

Downstream 100 bases:

>100_bases
TGGAGCTGCCCATGCGGACGATTCGTGGCGATCTGTTGCAACTTGCGCTCGACGGAGAGTTCGACGCGATCGTGCATGGC
TGCAATTGCCAATGCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF
PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG

Sequences:

>Translated_127_residues
MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF
PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG
>Mature_127_residues
MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVHGGDVEVIENDWPGNLIVIEF
PDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPHKATDVLG

Specific function: Unknown

COG id: COG5470

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14346; Mature: 14346

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEE
GGDVEVIENDWPGNLIVIEFPDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPH
CCCEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCC
KATDVLG
CHHCCCC
>Mature Secondary Structure
MFRQIALARPVGRSRCKGSYVMTAYAIAHMRQVTMGPQIVEYLHKIDATLEPFGGRFLVH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEE
GGDVEVIENDWPGNLIVIEFPDRRHVREWYDSPAYQAILSLRTDNSDSDVIIVDGVEHPH
CCCEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCC
KATDVLG
CHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA