| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473056
Identifier: 13473056
GI number: 13473056
Start: 2855694
End: 2856161
Strand: Reverse
Name: 13473056
Synonym: mll3540
Alternate gene names: NA
Gene position: 2856161-2855694 (Counterclockwise)
Preceding gene: 13473057
Following gene: 13473053
Centisome position: 40.59
GC content: 58.55
Gene sequence:
>468_bases ATGGAGCTGCCCATGCGGACGATTCGTGGCGATCTGTTGCAACTTGCGCTCGACGGAGAGTTCGACGCGATCGTGCATGG CTGCAATTGCCAATGCCAGATGGGCAAGGGCATTGCCCTTTCCATCAAGCAGCGGTTTCCAGAGGCCTACGCTGCGGATA TCGCGACCGTGAAAGGCGACCGCTCCAAGCTGGGTACTATCTCGGTTGCCGAGATCCGGCGCGAAGATCGAAATTTCCAC GTCATCAATGGCTACACCCAGTTCCATTGGCAGGGCCAGGGCATGAAGGCTGACTATGGCGCCATCCGCAGTGTCATGAA GGCGGTCAAGGCTGGATTCGCCGGCCGGAGTATCGGCTATCCCAGGATTGGCGCGGGTTTGGCGGGAGGCGATTGGGCAA CGATTGCTTCGATCATCGATGAGGAGCTTGCGGAAGAGAACCACAGGCTGGTCGAATACACGCCGTAA
Upstream 100 bases:
>100_bases ATCAGGCGATCCTTTCACTGCGCACCGATAATTCGGACTCTGACGTAATCATCGTTGACGGCGTCGAGCATCCGCACAAG GCTACCGATGTGCTTGGCTG
Downstream 100 bases:
>100_bases CGTCAGTTCCGTTTCAGCAGGAACACCGCCTGCTGGCCAAAGAAGTTCCAGAACCACCAGGGCATGGACAGGCCGATCTT CTGGCCGGCGGCGTCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Appr-1-P Processing
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MELPMRTIRGDLLQLALDGEFDAIVHGCNCQCQMGKGIALSIKQRFPEAYAADIATVKGDRSKLGTISVAEIRREDRNFH VINGYTQFHWQGQGMKADYGAIRSVMKAVKAGFAGRSIGYPRIGAGLAGGDWATIASIIDEELAEENHRLVEYTP
Sequences:
>Translated_155_residues MELPMRTIRGDLLQLALDGEFDAIVHGCNCQCQMGKGIALSIKQRFPEAYAADIATVKGDRSKLGTISVAEIRREDRNFH VINGYTQFHWQGQGMKADYGAIRSVMKAVKAGFAGRSIGYPRIGAGLAGGDWATIASIIDEELAEENHRLVEYTP >Mature_155_residues MELPMRTIRGDLLQLALDGEFDAIVHGCNCQCQMGKGIALSIKQRFPEAYAADIATVKGDRSKLGTISVAEIRREDRNFH VINGYTQFHWQGQGMKADYGAIRSVMKAVKAGFAGRSIGYPRIGAGLAGGDWATIASIIDEELAEENHRLVEYTP
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16986; Mature: 16986
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPMRTIRGDLLQLALDGEFDAIVHGCNCQCQMGKGIALSIKQRFPEAYAADIATVKGD CCCCHHHHHHHHEEEEECCCHHEEEECCCCEEECCCCEEEEHHHHCCHHHHHHHHHCCCC RSKLGTISVAEIRREDRNFHVINGYTQFHWQGQGMKADYGAIRSVMKAVKAGFAGRSIGY CCCCCCCHHHHHHHCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC PRIGAGLAGGDWATIASIIDEELAEENHRLVEYTP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MELPMRTIRGDLLQLALDGEFDAIVHGCNCQCQMGKGIALSIKQRFPEAYAADIATVKGD CCCCHHHHHHHHEEEEECCCHHEEEECCCCEEECCCCEEEEHHHHCCHHHHHHHHHCCCC RSKLGTISVAEIRREDRNFHVINGYTQFHWQGQGMKADYGAIRSVMKAVKAGFAGRSIGY CCCCCCCHHHHHHHCCCCEEEEECEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC PRIGAGLAGGDWATIASIIDEELAEENHRLVEYTP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA