| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473058
Identifier: 13473058
GI number: 13473058
Start: 2856621
End: 2857430
Strand: Reverse
Name: 13473058
Synonym: mll3542
Alternate gene names: NA
Gene position: 2857430-2856621 (Counterclockwise)
Preceding gene: 13473059
Following gene: 13473057
Centisome position: 40.61
GC content: 62.47
Gene sequence:
>810_bases GTGGCGATGCTTGATGCTCTGCGCCTGCTTGCCTGTCTTGCCTGTGTCCAGCCAACGCCCGTTGCCTCGCCATCGGGTGC GCCAGCTGTCGACGTCGAGTTGGTGTTGGCGGTCGATATATCCCTGTCGATGGACGAGAAGGAATTCGCCCTGCAACGCG CCGGCTATGTCGAAGCTCTGCGCCATCCCGACTTCATCCAGGCCGTCCGGTCCGGCAATGCGGGCCGCATCGCGATTGCC TATTTCGAATGGGCCGGCACGGTGCGCGACGACGCGGTCATCGATTGGCAGATCATCGACAGCGCGCAAAGCGCCAACAG CTTTGCCGACAAGGTGGCGGCGCGCCCGTTCCGGAGTTTTCGCGGTACCTCGATTTCCACGGCAATTGCCTTCGGCACAG GGCTGTTCGGCAGGACGAATTTCGCTGGTGAGCGCAGCGTCATCGATATATCGGGCGATGGCCCCAACAATATCGGGCCG CCGGTCACCGCGATGCGCGATGCGGCAACCGCAAAAGGCATCGTCATCAACGGCCTGCCGATCCTGATCAACCCATCGCC CACCTTCAAGCATCTTGACCAGTACTACGCGCAGTGCGTGATCGGCGGACCCGGTTCCTTCGTGTTGCCGATCCATACGG CCGCCGAATTTTCCACCGCCATCCGGCGCAAGCTGATCCTCGAGGTGAGCGGCATTCAGGGCAAGGCCAGCATCATCCCG GTCGACGCGGACGCACCGATCGACTGCCTGCAAGGCGAACGCGACAGGCGGTTCCTGTCAGATCCGTACTTTCCGGAACT CGACCGGTGA
Upstream 100 bases:
>100_bases CGTCCGCCGCAAGAAATAGGACTGCTTTTCCACATAGCCCAGCAAGCTTTATTTCGCCGCGATCGCGAAGGAAGATTTCC GCGAGAAACAAAATTTGGCG
Downstream 100 bases:
>100_bases ACTTGCGCAAGAGCGCTTGCGGCCGGCCGTCGAAGGCGCCGATTCCATTACCTCGGGCGTAATCGCTTTGCGTCAGGTGT TCCGGCAGATTGCCCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAMLDALRLLACLACVQPTPVASPSGAPAVDVELVLAVDISLSMDEKEFALQRAGYVEALRHPDFIQAVRSGNAGRIAIA YFEWAGTVRDDAVIDWQIIDSAQSANSFADKVAARPFRSFRGTSISTAIAFGTGLFGRTNFAGERSVIDISGDGPNNIGP PVTAMRDAATAKGIVINGLPILINPSPTFKHLDQYYAQCVIGGPGSFVLPIHTAAEFSTAIRRKLILEVSGIQGKASIIP VDADAPIDCLQGERDRRFLSDPYFPELDR
Sequences:
>Translated_269_residues MAMLDALRLLACLACVQPTPVASPSGAPAVDVELVLAVDISLSMDEKEFALQRAGYVEALRHPDFIQAVRSGNAGRIAIA YFEWAGTVRDDAVIDWQIIDSAQSANSFADKVAARPFRSFRGTSISTAIAFGTGLFGRTNFAGERSVIDISGDGPNNIGP PVTAMRDAATAKGIVINGLPILINPSPTFKHLDQYYAQCVIGGPGSFVLPIHTAAEFSTAIRRKLILEVSGIQGKASIIP VDADAPIDCLQGERDRRFLSDPYFPELDR >Mature_268_residues AMLDALRLLACLACVQPTPVASPSGAPAVDVELVLAVDISLSMDEKEFALQRAGYVEALRHPDFIQAVRSGNAGRIAIAY FEWAGTVRDDAVIDWQIIDSAQSANSFADKVAARPFRSFRGTSISTAIAFGTGLFGRTNFAGERSVIDISGDGPNNIGPP VTAMRDAATAKGIVINGLPILINPSPTFKHLDQYYAQCVIGGPGSFVLPIHTAAEFSTAIRRKLILEVSGIQGKASIIPV DADAPIDCLQGERDRRFLSDPYFPELDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28776; Mature: 28645
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLDALRLLACLACVQPTPVASPSGAPAVDVELVLAVDISLSMDEKEFALQRAGYVEAL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHH RHPDFIQAVRSGNAGRIAIAYFEWAGTVRDDAVIDWQIIDSAQSANSFADKVAARPFRSF CCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH RGTSISTAIAFGTGLFGRTNFAGERSVIDISGDGPNNIGPPVTAMRDAATAKGIVINGLP CCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECEE ILINPSPTFKHLDQYYAQCVIGGPGSFVLPIHTAAEFSTAIRRKLILEVSGIQGKASIIP EEECCCCCHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCEEEE VDADAPIDCLQGERDRRFLSDPYFPELDR ECCCCCHHHHCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure AMLDALRLLACLACVQPTPVASPSGAPAVDVELVLAVDISLSMDEKEFALQRAGYVEAL HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHH RHPDFIQAVRSGNAGRIAIAYFEWAGTVRDDAVIDWQIIDSAQSANSFADKVAARPFRSF CCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH RGTSISTAIAFGTGLFGRTNFAGERSVIDISGDGPNNIGPPVTAMRDAATAKGIVINGLP CCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECEE ILINPSPTFKHLDQYYAQCVIGGPGSFVLPIHTAAEFSTAIRRKLILEVSGIQGKASIIP EEECCCCCHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCEEEE VDADAPIDCLQGERDRRFLSDPYFPELDR ECCCCCHHHHCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA