| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is punA [H]
Identifier: 13472757
GI number: 13472757
Start: 2530108
End: 2530917
Strand: Direct
Name: punA [H]
Synonym: mlr3159
Alternate gene names: 13472757
Gene position: 2530108-2530917 (Clockwise)
Preceding gene: 13472756
Following gene: 13472758
Centisome position: 35.96
GC content: 67.04
Gene sequence:
>810_bases ATGACCGAAAAGGCGGTGGACCATCTGATCGAAAGGCTGGACGGCCTGGCGCCGTCGACGGCGCTGGTGCTGGGGTCGGG CCTCGGCGTCCTTGTCGACCGGATCGAGCACCCGATCCGCGTCCCCTATGCCGACCTGCCCGGGTTCCCCCGGAGCGGCG TCAGCGGCCATGCCGGCGAAGTGGTGGCGGGCCTGTTTGGCGGAAAGCCGGTGCTGATGCTGTCCGGCCGCGCCCATTAT TACGAGCATGGCAACGCGGCGGCGATGCGCCCGGTGCTGGAAGTGCTCGCCGGCATCGGCATCACCAAACTGATCCTCAC CAACGCCGCCGGTTCGGTCGACCCGGACATGCCGCCGGGCTCGGTGATGATGCTCACCGACCATATCAATTTCTCCGGCA GCAATCCGCTGATCGGCGAGCCCAGCGACCGCCGCTTCGTCGGCCTGACCGAAGCCTATGATGCCGGCATCCGCAAGGCG ATCGAGCGCGCCGCCAAGGCGACCGGTACCGCGCTGCACAAGGGCGTCTATATGTGGTTTTCCGGCCCGTGTTTCGAAAC GCCGGCCGAAATCCGCATGGCGCGCGTCATGGGCGCCAACGCCGTCGGCATGTCGACCGTGCCGGAAGTCATTCTTGCCC GCTTCCTTGGCCTGCGCGTCGCCGCCTGTTCGGTCATCACCAATCTGGCGGCCGGCATGACCGGAGCCGAGCTTTCGCAT CAGGAGACCAAGGACATGGCGCCAGTCGGCGGGTCGCGGCTGGCAACGGTCCTGCACAGAGTGTTCCGCGACGGACTGCT GGAGAGCTGA
Upstream 100 bases:
>100_bases GGGCGTGGCCGAGACCGTAACCATGGGCGACATGCTGCCCTATGGTTTCCGCGGCGACATCCTGAAATGAGGAATTGGCT CAAATGAAGAGTGGGCTGCA
Downstream 100 bases:
>100_bases TGCTTCCGCAGGAAATCATCCGCCACAAGCGAGACGGCCACAGGCTCTCGGCCGGTGAAATCGCTGCCTTCATCGGCGGC GTTACCTCGGGCGCCGTCAC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTEKAVDHLIERLDGLAPSTALVLGSGLGVLVDRIEHPIRVPYADLPGFPRSGVSGHAGEVVAGLFGGKPVLMLSGRAHY YEHGNAAAMRPVLEVLAGIGITKLILTNAAGSVDPDMPPGSVMMLTDHINFSGSNPLIGEPSDRRFVGLTEAYDAGIRKA IERAAKATGTALHKGVYMWFSGPCFETPAEIRMARVMGANAVGMSTVPEVILARFLGLRVAACSVITNLAAGMTGAELSH QETKDMAPVGGSRLATVLHRVFRDGLLES
Sequences:
>Translated_269_residues MTEKAVDHLIERLDGLAPSTALVLGSGLGVLVDRIEHPIRVPYADLPGFPRSGVSGHAGEVVAGLFGGKPVLMLSGRAHY YEHGNAAAMRPVLEVLAGIGITKLILTNAAGSVDPDMPPGSVMMLTDHINFSGSNPLIGEPSDRRFVGLTEAYDAGIRKA IERAAKATGTALHKGVYMWFSGPCFETPAEIRMARVMGANAVGMSTVPEVILARFLGLRVAACSVITNLAAGMTGAELSH QETKDMAPVGGSRLATVLHRVFRDGLLES >Mature_268_residues TEKAVDHLIERLDGLAPSTALVLGSGLGVLVDRIEHPIRVPYADLPGFPRSGVSGHAGEVVAGLFGGKPVLMLSGRAHYY EHGNAAAMRPVLEVLAGIGITKLILTNAAGSVDPDMPPGSVMMLTDHINFSGSNPLIGEPSDRRFVGLTEAYDAGIRKAI ERAAKATGTALHKGVYMWFSGPCFETPAEIRMARVMGANAVGMSTVPEVILARFLGLRVAACSVITNLAAGMTGAELSHQ ETKDMAPVGGSRLATVLHRVFRDGLLES
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=219, Percent_Identity=42.9223744292237, Blast_Score=171, Evalue=6e-43, Organism=Escherichia coli, GI1788746, Length=231, Percent_Identity=45.4545454545455, Blast_Score=201, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17541190, Length=241, Percent_Identity=37.344398340249, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323238, Length=224, Percent_Identity=41.5178571428571, Blast_Score=160, Evalue=1e-40, Organism=Drosophila melanogaster, GI24656093, Length=274, Percent_Identity=38.3211678832117, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24656090, Length=274, Percent_Identity=38.3211678832117, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI45552885, Length=269, Percent_Identity=38.2899628252788, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI45552887, Length=274, Percent_Identity=38.3211678832117, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI24762376, Length=251, Percent_Identity=34.2629482071713, Blast_Score=117, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 28262; Mature: 28131
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKAVDHLIERLDGLAPSTALVLGSGLGVLVDRIEHPIRVPYADLPGFPRSGVSGHAGE CCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH VVAGLFGGKPVLMLSGRAHYYEHGNAAAMRPVLEVLAGIGITKLILTNAAGSVDPDMPPG HHHHHHCCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC SVMMLTDHINFSGSNPLIGEPSDRRFVGLTEAYDAGIRKAIERAAKATGTALHKGVYMWF CEEEEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE SGPCFETPAEIRMARVMGANAVGMSTVPEVILARFLGLRVAACSVITNLAAGMTGAELSH CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCH QETKDMAPVGGSRLATVLHRVFRDGLLES HHHHCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEKAVDHLIERLDGLAPSTALVLGSGLGVLVDRIEHPIRVPYADLPGFPRSGVSGHAGE CHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH VVAGLFGGKPVLMLSGRAHYYEHGNAAAMRPVLEVLAGIGITKLILTNAAGSVDPDMPPG HHHHHHCCCEEEEECCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC SVMMLTDHINFSGSNPLIGEPSDRRFVGLTEAYDAGIRKAIERAAKATGTALHKGVYMWF CEEEEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE SGPCFETPAEIRMARVMGANAVGMSTVPEVILARFLGLRVAACSVITNLAAGMTGAELSH CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCH QETKDMAPVGGSRLATVLHRVFRDGLLES HHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]