| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472560
Identifier: 13472560
GI number: 13472560
Start: 2333081
End: 2334358
Strand: Reverse
Name: 13472560
Synonym: mll2895
Alternate gene names: NA
Gene position: 2334358-2333081 (Counterclockwise)
Preceding gene: 13472563
Following gene: 13472557
Centisome position: 33.18
GC content: 64.24
Gene sequence:
>1278_bases ATGGAGTTCGTAGCTGCGTTACGGCCGCGGTCGTCGGCAGCAGTGCCATGCGGGCTCCTGGCATCTTTTGTTTCGGGGGA AACGATGAGCGATTCATTTCGGGAAGTTACGTCCGTCTCGTGGTTCGGACGGATCAAGCGCGCGGTCGGCGGGGTCATCT TCGGTCTGCTCCTGATTGTGCTGATGGTGATCGGGCTGTTCTGGAATGAGGGCCGCGCGGTGCAGACGGCGCGCTCCCTG GCCGAAGGCGCCGGCGCCGTGGTCGCGATCAACGCCGACAGCGTCGATGCCGGCAATGACGGCAGGCTGGTGCATGTCAG CGGGCCGGTGACGGCCGATGGCAGCCTGTCGGATCCGGATTTCGGCATCGCCGCGCAAGGACTGCGGCTGTCGCGCAGCG TCGAGATGTACCAGTGGAAGGAGGAGTCCAAATCCGAGACCACCAAGAAGCTTGGCGGCGGCGAGGAGACGGAGACCACC TACAGCTATTCGAAAGTGTGGGACGACAGCCAGATCGATTCGTCGGACTTCAAGAAGCCGGACGGCCATCAGAACCCGCC AATGGCGATCCACAGCCGCGTCTTCCAGATTCCGCAGGGCAAGCTCGTCGCCTTCGATCTTGATACGCCGGTGCTCGACC GCATCGATGGCGACAAGGCATATTCGCTGTCGGCCAATCAGTCGGCGACGATCAAGGCCGCCTACACGGGCACGAAGCCG CTCAGCATCGTCGACGGCAGGATCTATCTCGGCAACGACAACACGACGCCCGCATTGGGCGACTACCGCATCGGCTACGA ACTGGCGCCGCTCGGCGTGGTCAGCATTGTGGCGCGGCAGGCCGGCAGCCGCTTCGAACCTTACCAGACCCAAGCGGGCG ATGCGCTGCTGATGGTCGATACCGGCAACGTGCCGGCCGACAAGATGTTCGCCGAGGCGGTGAGCGCCAACACGCTGATC ACCTGGCTGCTGCGCGCCGGCGGCCTTTTGCTGCTGACCATCGGCTTTGCCCTGTTCCTCAGTCCGATCGGCGTGATCCT CGACGTCATCCCGTTCCTCGGCAGCATGGCGCGGATGGGAACCGGAATCATCGCCTTCTTCCTGGCGATCCTGGTCGGCA CGACGACGATCGCGATTGCCTGGTTCTGGTATCGGCCGGTTCTGGCGGCAGGCATATTGGCGACCGGCGTCATCGCGGCG GCGGCGGTCTATTATCTCGGCCGCTCACGCAAGGCAGCCGCACCGATGGCCACGCCGAGCACCGGCACCGCAACATAG
Upstream 100 bases:
>100_bases TCGAGCGTGTGAAAATCCCGGGACTGCGCAAGCCGGCCATATCCGCGCTCCGCCCGATGCGATAGATTCGCAAGTGCTGA AGGGGTGGGCACCTTCGGCA
Downstream 100 bases:
>100_bases TTTGCAAAAAAGGGCTGATATGCCGCCCTTTTTTCCGCTCTGGGTTTGCGAGCAGGCCTAGCGGTCCTCGAAACCGGTCA GCACGCCGACGGCGTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MEFVAALRPRSSAAVPCGLLASFVSGETMSDSFREVTSVSWFGRIKRAVGGVIFGLLLIVLMVIGLFWNEGRAVQTARSL AEGAGAVVAINADSVDAGNDGRLVHVSGPVTADGSLSDPDFGIAAQGLRLSRSVEMYQWKEESKSETTKKLGGGEETETT YSYSKVWDDSQIDSSDFKKPDGHQNPPMAIHSRVFQIPQGKLVAFDLDTPVLDRIDGDKAYSLSANQSATIKAAYTGTKP LSIVDGRIYLGNDNTTPALGDYRIGYELAPLGVVSIVARQAGSRFEPYQTQAGDALLMVDTGNVPADKMFAEAVSANTLI TWLLRAGGLLLLTIGFALFLSPIGVILDVIPFLGSMARMGTGIIAFFLAILVGTTTIAIAWFWYRPVLAAGILATGVIAA AAVYYLGRSRKAAAPMATPSTGTAT
Sequences:
>Translated_425_residues MEFVAALRPRSSAAVPCGLLASFVSGETMSDSFREVTSVSWFGRIKRAVGGVIFGLLLIVLMVIGLFWNEGRAVQTARSL AEGAGAVVAINADSVDAGNDGRLVHVSGPVTADGSLSDPDFGIAAQGLRLSRSVEMYQWKEESKSETTKKLGGGEETETT YSYSKVWDDSQIDSSDFKKPDGHQNPPMAIHSRVFQIPQGKLVAFDLDTPVLDRIDGDKAYSLSANQSATIKAAYTGTKP LSIVDGRIYLGNDNTTPALGDYRIGYELAPLGVVSIVARQAGSRFEPYQTQAGDALLMVDTGNVPADKMFAEAVSANTLI TWLLRAGGLLLLTIGFALFLSPIGVILDVIPFLGSMARMGTGIIAFFLAILVGTTTIAIAWFWYRPVLAAGILATGVIAA AAVYYLGRSRKAAAPMATPSTGTAT >Mature_425_residues MEFVAALRPRSSAAVPCGLLASFVSGETMSDSFREVTSVSWFGRIKRAVGGVIFGLLLIVLMVIGLFWNEGRAVQTARSL AEGAGAVVAINADSVDAGNDGRLVHVSGPVTADGSLSDPDFGIAAQGLRLSRSVEMYQWKEESKSETTKKLGGGEETETT YSYSKVWDDSQIDSSDFKKPDGHQNPPMAIHSRVFQIPQGKLVAFDLDTPVLDRIDGDKAYSLSANQSATIKAAYTGTKP LSIVDGRIYLGNDNTTPALGDYRIGYELAPLGVVSIVARQAGSRFEPYQTQAGDALLMVDTGNVPADKMFAEAVSANTLI TWLLRAGGLLLLTIGFALFLSPIGVILDVIPFLGSMARMGTGIIAFFLAILVGTTTIAIAWFWYRPVLAAGILATGVIAA AAVYYLGRSRKAAAPMATPSTGTAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13236587, Length=397, Percent_Identity=31.2342569269521, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24660508, Length=357, Percent_Identity=29.9719887955182, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44989; Mature: 44989
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVAALRPRSSAAVPCGLLASFVSGETMSDSFREVTSVSWFGRIKRAVGGVIFGLLLIV CCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVIGLFWNEGRAVQTARSLAEGAGAVVAINADSVDAGNDGRLVHVSGPVTADGSLSDPD HHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC FGIAAQGLRLSRSVEMYQWKEESKSETTKKLGGGEETETTYSYSKVWDDSQIDSSDFKKP CCHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCC DGHQNPPMAIHSRVFQIPQGKLVAFDLDTPVLDRIDGDKAYSLSANQSATIKAAYTGTKP CCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCEEEECCCCCCEEEEEECCCCC LSIVDGRIYLGNDNTTPALGDYRIGYELAPLGVVSIVARQAGSRFEPYQTQAGDALLMVD EEEECCEEEECCCCCCCCCCCEECCEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE TGNVPADKMFAEAVSANTLITWLLRAGGLLLLTIGFALFLSPIGVILDVIPFLGSMARMG CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGIIAFFLAILVGTTTIAIAWFWYRPVLAAGILATGVIAAAAVYYLGRSRKAAAPMATPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC TGTAT CCCCC >Mature Secondary Structure MEFVAALRPRSSAAVPCGLLASFVSGETMSDSFREVTSVSWFGRIKRAVGGVIFGLLLIV CCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVIGLFWNEGRAVQTARSLAEGAGAVVAINADSVDAGNDGRLVHVSGPVTADGSLSDPD HHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC FGIAAQGLRLSRSVEMYQWKEESKSETTKKLGGGEETETTYSYSKVWDDSQIDSSDFKKP CCHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCCCCCC DGHQNPPMAIHSRVFQIPQGKLVAFDLDTPVLDRIDGDKAYSLSANQSATIKAAYTGTKP CCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCEEEECCCCCCEEEEEECCCCC LSIVDGRIYLGNDNTTPALGDYRIGYELAPLGVVSIVARQAGSRFEPYQTQAGDALLMVD EEEECCEEEECCCCCCCCCCCEECCEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE TGNVPADKMFAEAVSANTLITWLLRAGGLLLLTIGFALFLSPIGVILDVIPFLGSMARMG CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGIIAFFLAILVGTTTIAIAWFWYRPVLAAGILATGVIAAAAVYYLGRSRKAAAPMATPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC TGTAT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA