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The map label for this gene is ytcJ [H]

Identifier: 13472557

GI number: 13472557

Start: 2329377

End: 2331056

Strand: Reverse

Name: ytcJ [H]

Synonym: mll2891

Alternate gene names: 13472557

Gene position: 2331056-2329377 (Counterclockwise)

Preceding gene: 13472560

Following gene: 13472556

Centisome position: 33.13

GC content: 65.24

Gene sequence:

>1680_bases
ATGTCTGCTACGGGTACGGGTCACAATGCGGATCTGATCGTCATCAACGGTCGTGTGCTGACCATGGACGGTGGCAATCC
CGCAGCCGAGGCCGTTGCCGTCAAGGATGGCGCCATCATCGCCGTTGGCAGCCGCGCCGCCATCGAAGAACTCGAGGGAA
CGGCCACACAGGTGATCGACGCCAAGGGCGGTTCGGTCCTGCCCGGTTTCATCGAAGCCCATATGCATCTGTTCTCGGGA
GGGGCCGAGCTCGCGCATCTTCAGCTTGGCGGTGTCCATGGCTTCGAGGCGCTGAAACAGGTAATCCGCGACTATGCGTC
GACCAAGCCCGAGGCGAAAATGCTGGTCGGGCAGGGCGTCGACTACACCGTGCTCGACGACGAGCGGGTGACGCGCCATC
ATCTCGATGCCATCCTGCCGGATCGCCCGTTCTGCATGGCCGCGCCCGATCACCACACGATGTGGGCCAACACCAAGGCG
CTGGAGATGGCCGGCATACTGCATGGCCGCGCGCTTGGTCCGGGCAACGAAATCGTCATGGGCGACGATGGCCTGGCAGC
CGGCGAATTGCGCGAGGGCGAGGCCTTCGGCCCGGTGCTCGATCTTGCCGGAGAGGGCCGGGTGCGGCTGGGGCTGGCGA
CCGGTGGCGAGCCGGATCCGATGCCGTCGGCCACCGAACGCGCCGCCGACCGCGACATCATGCGACGCGGCCTCGCCTGG
TGCGCGCGCCACGGCATCACCTCCATCCAGAACATGGACGGCAATCTCTACCAGCTCGAATTGCTGGCCGAGATCGACGC
CGAGGAAGGCTTGCCCTGCCGCGTGCAGATCCCGTTCCACTACAAGAATTTCATGACGCTCGACATGCTCGACAAGGCAT
CGGTCATGACCGAGCGCTACAACAGCGAGTGGCTGTCGTGCGGCATGGTCAAGGTGTTCTATGACGGCGTGCTCGATTCC
TGGACGGCCGTCATGGTCGAGCCCTACGCCGACCGTACCGACTGGGTGGGCGAACCGCTGTTCACGCCGCAGCAGTTCGC
CGATCTTGCCGTTGCCGTCGACAAGCGCGGTCTGCAGATGGCGGTCCACTCGATCGGCGACGGCGCGGTGCGTGCGGTGC
TCGACGGCTACGAGGCGGCGCAAAAGGCCAATGGCAAACGCGACAGCCGTCACCGCGTCGAACATATCGAGGTCACCACC
ACCGCGGACGTGCCGCGCTTCGCCGAACTCGGCGTCATCGCCTCGATGCAGCCGCCGCATCCGCCCGGCGCCATGGATTT
CCCGCTGGAGCCGACAGTGTCGCGCATCGGGCCGGCCCGCTGGCCGCTGAGCTATGCCTGGCGGACCCTGAAGAATGCCG
GCGCGCATGTCGTCTTCGCCTCGGATTGGCCGGTGTCGCCGATCGACCCGATCCTGGGCATTCAGGCGGCAGTGATGCGC
AAACCATGGGCAGACAGCGACCCGGACCAGAGTTTTTCGCTGCAGGAATCGCTGGCCGCCTACACGGTCGAGGGCGCCTA
TGCCGAATTCGCCGAACACCGCAAGGGCACGCTGAAATCAGGCTATATGGCCGATCTTGTGGTTCTGTCGGCCGATATCG
AGAAGACGGCGCCGGCCCATCTGCACAAGGTGCGCCCGGTGACGACGATTTGCGGTGGCAAGGTCACCTATCAGGCCTGA

Upstream 100 bases:

>100_bases
TGGCATCGTTTTTTGTTCCGTGGCGCCGCTCCGGTGGAGTGGCAGGCCGTTGAGCGCAGGGCTGTCGGTCTCAGTCGGTC
ATCAAAAGCGCGGAGTCGCG

Downstream 100 bases:

>100_bases
CAATGGCATGAGGCTTGCTGGCTGAAAGCGGACTGAACTGTGATTCAATGCCGGGCTTGCCAACCTACCGGGCGTGTGGT
CACATCGAACAGGGGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MSATGTGHNADLIVINGRVLTMDGGNPAAEAVAVKDGAIIAVGSRAAIEELEGTATQVIDAKGGSVLPGFIEAHMHLFSG
GAELAHLQLGGVHGFEALKQVIRDYASTKPEAKMLVGQGVDYTVLDDERVTRHHLDAILPDRPFCMAAPDHHTMWANTKA
LEMAGILHGRALGPGNEIVMGDDGLAAGELREGEAFGPVLDLAGEGRVRLGLATGGEPDPMPSATERAADRDIMRRGLAW
CARHGITSIQNMDGNLYQLELLAEIDAEEGLPCRVQIPFHYKNFMTLDMLDKASVMTERYNSEWLSCGMVKVFYDGVLDS
WTAVMVEPYADRTDWVGEPLFTPQQFADLAVAVDKRGLQMAVHSIGDGAVRAVLDGYEAAQKANGKRDSRHRVEHIEVTT
TADVPRFAELGVIASMQPPHPPGAMDFPLEPTVSRIGPARWPLSYAWRTLKNAGAHVVFASDWPVSPIDPILGIQAAVMR
KPWADSDPDQSFSLQESLAAYTVEGAYAEFAEHRKGTLKSGYMADLVVLSADIEKTAPAHLHKVRPVTTICGGKVTYQA

Sequences:

>Translated_559_residues
MSATGTGHNADLIVINGRVLTMDGGNPAAEAVAVKDGAIIAVGSRAAIEELEGTATQVIDAKGGSVLPGFIEAHMHLFSG
GAELAHLQLGGVHGFEALKQVIRDYASTKPEAKMLVGQGVDYTVLDDERVTRHHLDAILPDRPFCMAAPDHHTMWANTKA
LEMAGILHGRALGPGNEIVMGDDGLAAGELREGEAFGPVLDLAGEGRVRLGLATGGEPDPMPSATERAADRDIMRRGLAW
CARHGITSIQNMDGNLYQLELLAEIDAEEGLPCRVQIPFHYKNFMTLDMLDKASVMTERYNSEWLSCGMVKVFYDGVLDS
WTAVMVEPYADRTDWVGEPLFTPQQFADLAVAVDKRGLQMAVHSIGDGAVRAVLDGYEAAQKANGKRDSRHRVEHIEVTT
TADVPRFAELGVIASMQPPHPPGAMDFPLEPTVSRIGPARWPLSYAWRTLKNAGAHVVFASDWPVSPIDPILGIQAAVMR
KPWADSDPDQSFSLQESLAAYTVEGAYAEFAEHRKGTLKSGYMADLVVLSADIEKTAPAHLHKVRPVTTICGGKVTYQA
>Mature_558_residues
SATGTGHNADLIVINGRVLTMDGGNPAAEAVAVKDGAIIAVGSRAAIEELEGTATQVIDAKGGSVLPGFIEAHMHLFSGG
AELAHLQLGGVHGFEALKQVIRDYASTKPEAKMLVGQGVDYTVLDDERVTRHHLDAILPDRPFCMAAPDHHTMWANTKAL
EMAGILHGRALGPGNEIVMGDDGLAAGELREGEAFGPVLDLAGEGRVRLGLATGGEPDPMPSATERAADRDIMRRGLAWC
ARHGITSIQNMDGNLYQLELLAEIDAEEGLPCRVQIPFHYKNFMTLDMLDKASVMTERYNSEWLSCGMVKVFYDGVLDSW
TAVMVEPYADRTDWVGEPLFTPQQFADLAVAVDKRGLQMAVHSIGDGAVRAVLDGYEAAQKANGKRDSRHRVEHIEVTTT
ADVPRFAELGVIASMQPPHPPGAMDFPLEPTVSRIGPARWPLSYAWRTLKNAGAHVVFASDWPVSPIDPILGIQAAVMRK
PWADSDPDQSFSLQESLAAYTVEGAYAEFAEHRKGTLKSGYMADLVVLSADIEKTAPAHLHKVRPVTTICGGKVTYQA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60237; Mature: 60106

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATGTGHNADLIVINGRVLTMDGGNPAAEAVAVKDGAIIAVGSRAAIEELEGTATQVID
CCCCCCCCCCEEEEECCEEEEECCCCCHHCEEEEECCCEEEECCHHHHHHHCCCCEEEEE
AKGGSVLPGFIEAHMHLFSGGAELAHLQLGGVHGFEALKQVIRDYASTKPEAKMLVGQGV
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC
DYTVLDDERVTRHHLDAILPDRPFCMAAPDHHTMWANTKALEMAGILHGRALGPGNEIVM
CEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEE
GDDGLAAGELREGEAFGPVLDLAGEGRVRLGLATGGEPDPMPSATERAADRDIMRRGLAW
CCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
CARHGITSIQNMDGNLYQLELLAEIDAEEGLPCRVQIPFHYKNFMTLDMLDKASVMTERY
HHHHCCCHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHH
NSEWLSCGMVKVFYDGVLDSWTAVMVEPYADRTDWVGEPLFTPQQFADLAVAVDKRGLQM
CCHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
AVHSIGDGAVRAVLDGYEAAQKANGKRDSRHRVEHIEVTTTADVPRFAELGVIASMQPPH
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCEEECCCCCC
PPGAMDFPLEPTVSRIGPARWPLSYAWRTLKNAGAHVVFASDWPVSPIDPILGIQAAVMR
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC
KPWADSDPDQSFSLQESLAAYTVEGAYAEFAEHRKGTLKSGYMADLVVLSADIEKTAPAH
CCCCCCCCCCCCCHHHHHHHEEECHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHH
LHKVRPVTTICGGKVTYQA
HHHCCCEEEECCCEEEECC
>Mature Secondary Structure 
SATGTGHNADLIVINGRVLTMDGGNPAAEAVAVKDGAIIAVGSRAAIEELEGTATQVID
CCCCCCCCCEEEEECCEEEEECCCCCHHCEEEEECCCEEEECCHHHHHHHCCCCEEEEE
AKGGSVLPGFIEAHMHLFSGGAELAHLQLGGVHGFEALKQVIRDYASTKPEAKMLVGQGV
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC
DYTVLDDERVTRHHLDAILPDRPFCMAAPDHHTMWANTKALEMAGILHGRALGPGNEIVM
CEEEECCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEE
GDDGLAAGELREGEAFGPVLDLAGEGRVRLGLATGGEPDPMPSATERAADRDIMRRGLAW
CCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
CARHGITSIQNMDGNLYQLELLAEIDAEEGLPCRVQIPFHYKNFMTLDMLDKASVMTERY
HHHHCCCHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHH
NSEWLSCGMVKVFYDGVLDSWTAVMVEPYADRTDWVGEPLFTPQQFADLAVAVDKRGLQM
CCHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
AVHSIGDGAVRAVLDGYEAAQKANGKRDSRHRVEHIEVTTTADVPRFAELGVIASMQPPH
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCEEECCCCCC
PPGAMDFPLEPTVSRIGPARWPLSYAWRTLKNAGAHVVFASDWPVSPIDPILGIQAAVMR
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC
KPWADSDPDQSFSLQESLAAYTVEGAYAEFAEHRKGTLKSGYMADLVVLSADIEKTAPAH
CCCCCCCCCCCCCHHHHHHHEEECHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHH
LHKVRPVTTICGGKVTYQA
HHHCCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]