Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472563

Identifier: 13472563

GI number: 13472563

Start: 2336280

End: 2336714

Strand: Reverse

Name: 13472563

Synonym: mll2898

Alternate gene names: NA

Gene position: 2336714-2336280 (Counterclockwise)

Preceding gene: 13472564

Following gene: 13472560

Centisome position: 33.21

GC content: 61.15

Gene sequence:

>435_bases
ATGAACCGCCAACCACACGCAAAATCCCGCGAGATCATCGTCGCCAGCGCCATCGAGCAGGTGGTTGGCGAACTGAGATT
GATCGATGTCGCCGACTACATCGCCTTCATCCGGCTTGAGCATTTCGCTTGCCTATCGGATCTGGTCGATTCAGCGGTGG
AGCTGTTCTTCATGCCGGGCACGCTCAAACTCGGCCATGGCGGCGAGGCGCATGTCGACTGGAGCGGCACTCCGCGCATC
GTGCTCGACCTCGAGCTCAGGCCACCCGGGGTGACCGTCTATTTTCAGCTGACGCTGAGCGAGGCCGGCAATTCGGTCGC
GGTCAATTACGTGTCGTTCGAAAAGCCCGGCGAGGACCCCGAGCACAATACGGCGCTGCTGGAGGCGGTGATCGAACAGG
CCCGGATCCGCAAGGTCGAGCCTATGGCCTTTTGA

Upstream 100 bases:

>100_bases
AAGTTTCGGTCGATAATGTGATCCCGTCGCAATTCTACCAGGCCGTCGCCGAACTGGTGCGGATCGTCTACTCGAAAAAG
GCTGAGCGCAGACAGATTTC

Downstream 100 bases:

>100_bases
ACGCCCTGTCAGGCGGCAGCTGTTACTCGATCAGGCCCAGCCGCAGCGCCTTGGCGACCGCCTGGTTGCGGTTGACGGCG
TTGAGTTTCTGCGTCGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNRQPHAKSREIIVASAIEQVVGELRLIDVADYIAFIRLEHFACLSDLVDSAVELFFMPGTLKLGHGGEAHVDWSGTPRI
VLDLELRPPGVTVYFQLTLSEAGNSVAVNYVSFEKPGEDPEHNTALLEAVIEQARIRKVEPMAF

Sequences:

>Translated_144_residues
MNRQPHAKSREIIVASAIEQVVGELRLIDVADYIAFIRLEHFACLSDLVDSAVELFFMPGTLKLGHGGEAHVDWSGTPRI
VLDLELRPPGVTVYFQLTLSEAGNSVAVNYVSFEKPGEDPEHNTALLEAVIEQARIRKVEPMAF
>Mature_144_residues
MNRQPHAKSREIIVASAIEQVVGELRLIDVADYIAFIRLEHFACLSDLVDSAVELFFMPGTLKLGHGGEAHVDWSGTPRI
VLDLELRPPGVTVYFQLTLSEAGNSVAVNYVSFEKPGEDPEHNTALLEAVIEQARIRKVEPMAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti R00649 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017024 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15941; Mature: 15941

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQPHAKSREIIVASAIEQVVGELRLIDVADYIAFIRLEHFACLSDLVDSAVELFFMPG
CCCCCCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
TLKLGHGGEAHVDWSGTPRIVLDLELRPPGVTVYFQLTLSEAGNSVAVNYVSFEKPGEDP
EEEECCCCCEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCC
EHNTALLEAVIEQARIRKVEPMAF
CHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNRQPHAKSREIIVASAIEQVVGELRLIDVADYIAFIRLEHFACLSDLVDSAVELFFMPG
CCCCCCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
TLKLGHGGEAHVDWSGTPRIVLDLELRPPGVTVYFQLTLSEAGNSVAVNYVSFEKPGEDP
EEEECCCCCEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCC
EHNTALLEAVIEQARIRKVEPMAF
CHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10411267; 11743193; 11743194 [H]