| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472490
Identifier: 13472490
GI number: 13472490
Start: 2250727
End: 2251542
Strand: Direct
Name: 13472490
Synonym: mlr2805
Alternate gene names: NA
Gene position: 2250727-2251542 (Clockwise)
Preceding gene: 13472489
Following gene: 13472491
Centisome position: 31.99
GC content: 65.2
Gene sequence:
>816_bases GTGGAACAAGAAAATCAACTTAGCAGGACGAAACCGTTGGACGATCGAAAGAAGGACGTGATCCGCCAAACCGACGCCGA GGCGATCCGGTTGGCGAAGACGCTTCTGCGCAGCGCCCGCTTCGGCGCCCTGGCGGTGCTGGAGCCGCGGACCGGGTCGC CGCTGGCGAGCCGGGTCGGCGTCGCCACCGACATCGACGGCGCGCCGCTGATCCTGGTCTCGATGCTCTCGGCGCACACG CCCGCCATGCTTGCCGATCCGCGCTGTTCCCTGCTGCTCGGCGAGCCCGGCAAAGGCGACCCGCTGGCGCATCCGCGCTT GTCGCTGATCTGCCAGGCATCGCGGCTCGAGCGTGGCTCTGACGCGCACACCCGCGCCGAGCGCCGCTATCTCAACCGCA ATCCCAAGGCGAACCTCTATGCCGGGCTCGGCGACTTCTCGATCTTTCGCCTCGAGCCGCAGCGCGCCAGCCTCAATGGC GGCTTCGGCAAGGCCTATCTGCTCGATCGCTCCGATCTCGTCACTGTCGGCCCCATCGTCCAAGAGCTTGCGGCGAGCGA ACAATCCGCCATCGAGCACATGAACGCGGACCATCTGGACGCGATCGCCGTTTACGCGCATGATTACGCCGGGGCATCTT CCGACGGCTGGGGCATCGCCGGTTTGGACGCCGATGGCATGGATCTCGTGTCGGGAGACAATGTTTGCCGGGTATTCTTT CCACAACCCCTGATAGCGGCGCGGGAATTACGGCCCGTTCTGGTCGAAATGGCCAGGGGCGGCCGCGCGGCCAGGCAGGC AAATAATGAAACTTAA
Upstream 100 bases:
>100_bases TCCGCATGGCGCCGAAATAGTATAAGTCACCCGGAAGTGCGATGCGGCTCCAGGCGACTTGCATAGAACGCTTGCCAGGA CCGGCATCATCGTCTGATAA
Downstream 100 bases:
>100_bases TTGCATTTGATCAAAAGCAACACTTGAGATTTAAAAGAAATGTTCTACCCTTCGGTGATGGCGCTGACTCGTCGGTGGCC ATTCGCAAGTGAATTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine Oxidase Protein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MEQENQLSRTKPLDDRKKDVIRQTDAEAIRLAKTLLRSARFGALAVLEPRTGSPLASRVGVATDIDGAPLILVSMLSAHT PAMLADPRCSLLLGEPGKGDPLAHPRLSLICQASRLERGSDAHTRAERRYLNRNPKANLYAGLGDFSIFRLEPQRASLNG GFGKAYLLDRSDLVTVGPIVQELAASEQSAIEHMNADHLDAIAVYAHDYAGASSDGWGIAGLDADGMDLVSGDNVCRVFF PQPLIAARELRPVLVEMARGGRAARQANNET
Sequences:
>Translated_271_residues MEQENQLSRTKPLDDRKKDVIRQTDAEAIRLAKTLLRSARFGALAVLEPRTGSPLASRVGVATDIDGAPLILVSMLSAHT PAMLADPRCSLLLGEPGKGDPLAHPRLSLICQASRLERGSDAHTRAERRYLNRNPKANLYAGLGDFSIFRLEPQRASLNG GFGKAYLLDRSDLVTVGPIVQELAASEQSAIEHMNADHLDAIAVYAHDYAGASSDGWGIAGLDADGMDLVSGDNVCRVFF PQPLIAARELRPVLVEMARGGRAARQANNET >Mature_271_residues MEQENQLSRTKPLDDRKKDVIRQTDAEAIRLAKTLLRSARFGALAVLEPRTGSPLASRVGVATDIDGAPLILVSMLSAHT PAMLADPRCSLLLGEPGKGDPLAHPRLSLICQASRLERGSDAHTRAERRYLNRNPKANLYAGLGDFSIFRLEPQRASLNG GFGKAYLLDRSDLVTVGPIVQELAASEQSAIEHMNADHLDAIAVYAHDYAGASSDGWGIAGLDADGMDLVSGDNVCRVFF PQPLIAARELRPVLVEMARGGRAARQANNET
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29214; Mature: 29214
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQENQLSRTKPLDDRKKDVIRQTDAEAIRLAKTLLRSARFGALAVLEPRTGSPLASRVG CCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCC VATDIDGAPLILVSMLSAHTPAMLADPRCSLLLGEPGKGDPLAHPRLSLICQASRLERGS CCCCCCCCHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC DAHTRAERRYLNRNPKANLYAGLGDFSIFRLEPQRASLNGGFGKAYLLDRSDLVTVGPIV CHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHCCCCCCCEEEEECCCCCEEHHHHH QELAASEQSAIEHMNADHLDAIAVYAHDYAGASSDGWGIAGLDADGMDLVSGDNVCRVFF HHHHHHHHHHHHHCCCCCHHEEEEEEHHCCCCCCCCCEEEECCCCCCEEECCCCEEEEEC PQPLIAARELRPVLVEMARGGRAARQANNET CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure MEQENQLSRTKPLDDRKKDVIRQTDAEAIRLAKTLLRSARFGALAVLEPRTGSPLASRVG CCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCC VATDIDGAPLILVSMLSAHTPAMLADPRCSLLLGEPGKGDPLAHPRLSLICQASRLERGS CCCCCCCCHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC DAHTRAERRYLNRNPKANLYAGLGDFSIFRLEPQRASLNGGFGKAYLLDRSDLVTVGPIV CHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHCCCCCCCEEEEECCCCCEEHHHHH QELAASEQSAIEHMNADHLDAIAVYAHDYAGASSDGWGIAGLDADGMDLVSGDNVCRVFF HHHHHHHHHHHHHCCCCCHHEEEEEEHHCCCCCCCCCEEEECCCCCCEEECCCCEEEEEC PQPLIAARELRPVLVEMARGGRAARQANNET CCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA