| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472438
Identifier: 13472438
GI number: 13472438
Start: 2193293
End: 2194234
Strand: Direct
Name: 13472438
Synonym: mlr2732
Alternate gene names: NA
Gene position: 2193293-2194234 (Clockwise)
Preceding gene: 13472437
Following gene: 13472439
Centisome position: 31.17
GC content: 68.37
Gene sequence:
>942_bases ATGGCGCGTATCGGCGAGGTCCAGGCTCCGGCAGCGACGCGCGACGCGCTCGCCCGTGGCCGGTTGCGGGCTTCGCTTGT GCCGGACCTGCTGGTCGAGGCGCGCCGCATCGTCAACACCGTGATCGCCGGCTGGCATGGCCGCCGCAAACGCGGCATCG GCGAGAATTTCTGGCAGTTCCGGCCCTATGTCGAGGGCGATTCCTCGCGCATCGACTGGCGCCGCTCGGCGCGCGACGAC CACACCTATGTGCGCGACCGCGAATGGGAAGCCGCCCATACGGTATGGTTGTGGGCCGACCCCTCGCCGTCCATGCTCTA CAAATCGACCGGCGCCAGCGTCTCCAAGCAGTCGCGCGCACTGGTGCTGGCGCTGGCCATGGCCGAACTGCTGTCGCGCA GCGGCGAACGCATTGCCTGGCCGGGCCTGACCGATCCGTTCACCGCCCGCAACGGCGCCGAGCGCATCGCCGCCCAGCTG ATGCATGCCGGCGACTTGCCGGCAAAGCCTGACCTCACGGACATCAGGCGCTTCTGCGACATCGTCATCGCCAGCGATTT CCTCGATCCGGTCGAGGAGACGATGGAATGGCTCGACGTCCTCGCCCGCCACGGCGTGCGCGCCCATCTGATCGAGGTTG CCGACCCGGCCGAGGAAACCTTCCCCTATGCCGGCCGCACCGAGTTCACCGACCCCGAGACCGGCGAAAAGCTGACCGCC GGACGTGCCGAAATGCTCGGCGACGAATACCGCCTGCTCTACACCGCCCGCCGCCAGGAGCTGGCCGGCTGGTGCAGGCG GCTCGGCTGGAGTTTTACAGTCAACCACACCGATCGGCTGGCGTCCGACGCGCTGGTGCGCCTGCATATGGCAATGACGG CCGATGGCGGCTATGCCGGTAGCGGTCGTACCGGTCAGCCTGGAAAGGCGGTCGGCGCATGA
Upstream 100 bases:
>100_bases CCGAGCCGGTGCTGCAGCACCGCATGGCGCTGACCTTCGCCGCCCGCGCCGAAGGCACCAGCGTGCGCGACGTGGTGGCG AAACTCGTGAAAGGGATTTG
Downstream 100 bases:
>100_bases GCTGGCTGCCGCTCTCCTTTGGCGCTCCCATGGTGCTGTGGGGCCTGCTGGCGCTGCCGGTGATCTGGTGGCTGCTCAGG CTGACCCCGCCCAAGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MARIGEVQAPAATRDALARGRLRASLVPDLLVEARRIVNTVIAGWHGRRKRGIGENFWQFRPYVEGDSSRIDWRRSARDD HTYVRDREWEAAHTVWLWADPSPSMLYKSTGASVSKQSRALVLALAMAELLSRSGERIAWPGLTDPFTARNGAERIAAQL MHAGDLPAKPDLTDIRRFCDIVIASDFLDPVEETMEWLDVLARHGVRAHLIEVADPAEETFPYAGRTEFTDPETGEKLTA GRAEMLGDEYRLLYTARRQELAGWCRRLGWSFTVNHTDRLASDALVRLHMAMTADGGYAGSGRTGQPGKAVGA
Sequences:
>Translated_313_residues MARIGEVQAPAATRDALARGRLRASLVPDLLVEARRIVNTVIAGWHGRRKRGIGENFWQFRPYVEGDSSRIDWRRSARDD HTYVRDREWEAAHTVWLWADPSPSMLYKSTGASVSKQSRALVLALAMAELLSRSGERIAWPGLTDPFTARNGAERIAAQL MHAGDLPAKPDLTDIRRFCDIVIASDFLDPVEETMEWLDVLARHGVRAHLIEVADPAEETFPYAGRTEFTDPETGEKLTA GRAEMLGDEYRLLYTARRQELAGWCRRLGWSFTVNHTDRLASDALVRLHMAMTADGGYAGSGRTGQPGKAVGA >Mature_312_residues ARIGEVQAPAATRDALARGRLRASLVPDLLVEARRIVNTVIAGWHGRRKRGIGENFWQFRPYVEGDSSRIDWRRSARDDH TYVRDREWEAAHTVWLWADPSPSMLYKSTGASVSKQSRALVLALAMAELLSRSGERIAWPGLTDPFTARNGAERIAAQLM HAGDLPAKPDLTDIRRFCDIVIASDFLDPVEETMEWLDVLARHGVRAHLIEVADPAEETFPYAGRTEFTDPETGEKLTAG RAEMLGDEYRLLYTARRQELAGWCRRLGWSFTVNHTDRLASDALVRLHMAMTADGGYAGSGRTGQPGKAVGA
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34867; Mature: 34736
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIGEVQAPAATRDALARGRLRASLVPDLLVEARRIVNTVIAGWHGRRKRGIGENFWQF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHC RPYVEGDSSRIDWRRSARDDHTYVRDREWEAAHTVWLWADPSPSMLYKSTGASVSKQSRA CCCCCCCCCCCCHHHCCCCCCCHHCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHH LVLALAMAELLSRSGERIAWPGLTDPFTARNGAERIAAQLMHAGDLPAKPDLTDIRRFCD HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IVIASDFLDPVEETMEWLDVLARHGVRAHLIEVADPAEETFPYAGRTEFTDPETGEKLTA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHC GRAEMLGDEYRLLYTARRQELAGWCRRLGWSFTVNHTDRLASDALVRLHMAMTADGGYAG CHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHEECCCCCCC SGRTGQPGKAVGA CCCCCCCCCCCCC >Mature Secondary Structure ARIGEVQAPAATRDALARGRLRASLVPDLLVEARRIVNTVIAGWHGRRKRGIGENFWQF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHC RPYVEGDSSRIDWRRSARDDHTYVRDREWEAAHTVWLWADPSPSMLYKSTGASVSKQSRA CCCCCCCCCCCCHHHCCCCCCCHHCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHH LVLALAMAELLSRSGERIAWPGLTDPFTARNGAERIAAQLMHAGDLPAKPDLTDIRRFCD HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH IVIASDFLDPVEETMEWLDVLARHGVRAHLIEVADPAEETFPYAGRTEFTDPETGEKLTA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHC GRAEMLGDEYRLLYTARRQELAGWCRRLGWSFTVNHTDRLASDALVRLHMAMTADGGYAG CHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHEECCCCCCC SGRTGQPGKAVGA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA