| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yeaC [H]
Identifier: 13472437
GI number: 13472437
Start: 2192289
End: 2193293
Strand: Direct
Name: yeaC [H]
Synonym: mlr2730
Alternate gene names: 13472437
Gene position: 2192289-2193293 (Clockwise)
Preceding gene: 13472433
Following gene: 13472438
Centisome position: 31.16
GC content: 66.67
Gene sequence:
>1005_bases ATGAGCGTGATGGTCAAGGAAAGCCCGATCAGCGAAACGGACATGATCGCCGAGGCCGAAAAGGCGCTGGCCGACATTTC CAGGATCCGCGACGGGGTCGGCCGGGTGATCTTCGGCCAGGAGAACGTCGTCGAGCGCACGCTGGTGGCGCTGCTGGCCG GTGGCCATGCGCTGCTGGTCGGTGTTCCCGGCCTCGCCAAGACCAAGCTGGTCGAAACGCTGGGCGTCGTGCTCGGCCTC GATTCGCGCCGCATCCAGTTCACACCCGATTTGATGCCGTCGGACATCCTCGGCTCCGAGGTGATGGAGCAGGACGAGAT CGGCAAGCGCTCCTTCCGCTTTATCTCCGGACCGATCTTCGCCCAGTTGCTGATGGCCGACGAGATCAACCGCGCCTCGC CGCGTACCCAGTCGGCGCTGCTGCAGGCCATGCAGGAATACCACGTCACCATCGCCGGCGCCCGCTATGACCTGCCAGCG CCCTTCCATGTGCTTGCGACGCAGAACCCGCTGGAGCAGGAAGGCACCTATCCGCTGCCCGAAGCCCAGCTCGACCGCTT CCTGATGCAGGTCGATATCCTCTACCCCGAAATCGAGGCCGAGCGCCGCATCCTCCTGGAAACCACAGGCATCGAGGATG CCAAGGCGCAGAACGTGCTGCAGCCGGCGCGGCTGAAGGAAATCCAGACGCTGATCCGCCGCATGCCGGTGCCCGAAAGC GTCGTCGAGGCGATCCTCACCCTGGTGCGCTCGGCGCGCCCGGGCCAAGGCAATGCCGAAACCGACAAGCATGTCGCCTG GGGCCCGGGCCCGCGCGCCAGCCAGGCGTTGATGCTGTGCACGAGGGCGCGTGCGCTCTATGACGGGCGGCTGGCGCCCT CGGTCGACGATGTGCGGGCACTGGCCGAGCCGGTGCTGCAGCACCGCATGGCGCTGACCTTCGCCGCCCGCGCCGAAGGC ACCAGCGTGCGCGACGTGGTGGCGAAACTCGTGAAAGGGATTTGA
Upstream 100 bases:
>100_bases GTCTGTGATTTAAGTTCGACCATAGGCGCTAGGCGAGGCCGAATCGCGGCGCCTATGATATGGTGCGGGCTGGTATTTCC AACCAAAGGGATCGAGCCGA
Downstream 100 bases:
>100_bases TGGCGCGTATCGGCGAGGTCCAGGCTCCGGCAGCGACGCGCGACGCGCTCGCCCGTGGCCGGTTGCGGGCTTCGCTTGTG CCGGACCTGCTGGTCGAGGC
Product: regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSVMVKESPISETDMIAEAEKALADISRIRDGVGRVIFGQENVVERTLVALLAGGHALLVGVPGLAKTKLVETLGVVLGL DSRRIQFTPDLMPSDILGSEVMEQDEIGKRSFRFISGPIFAQLLMADEINRASPRTQSALLQAMQEYHVTIAGARYDLPA PFHVLATQNPLEQEGTYPLPEAQLDRFLMQVDILYPEIEAERRILLETTGIEDAKAQNVLQPARLKEIQTLIRRMPVPES VVEAILTLVRSARPGQGNAETDKHVAWGPGPRASQALMLCTRARALYDGRLAPSVDDVRALAEPVLQHRMALTFAARAEG TSVRDVVAKLVKGI
Sequences:
>Translated_334_residues MSVMVKESPISETDMIAEAEKALADISRIRDGVGRVIFGQENVVERTLVALLAGGHALLVGVPGLAKTKLVETLGVVLGL DSRRIQFTPDLMPSDILGSEVMEQDEIGKRSFRFISGPIFAQLLMADEINRASPRTQSALLQAMQEYHVTIAGARYDLPA PFHVLATQNPLEQEGTYPLPEAQLDRFLMQVDILYPEIEAERRILLETTGIEDAKAQNVLQPARLKEIQTLIRRMPVPES VVEAILTLVRSARPGQGNAETDKHVAWGPGPRASQALMLCTRARALYDGRLAPSVDDVRALAEPVLQHRMALTFAARAEG TSVRDVVAKLVKGI >Mature_333_residues SVMVKESPISETDMIAEAEKALADISRIRDGVGRVIFGQENVVERTLVALLAGGHALLVGVPGLAKTKLVETLGVVLGLD SRRIQFTPDLMPSDILGSEVMEQDEIGKRSFRFISGPIFAQLLMADEINRASPRTQSALLQAMQEYHVTIAGARYDLPAP FHVLATQNPLEQEGTYPLPEAQLDRFLMQVDILYPEIEAERRILLETTGIEDAKAQNVLQPARLKEIQTLIRRMPVPESV VEAILTLVRSARPGQGNAETDKHVAWGPGPRASQALMLCTRARALYDGRLAPSVDDVRALAEPVLQHRMALTFAARAEGT SVRDVVAKLVKGI
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36553; Mature: 36422
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVMVKESPISETDMIAEAEKALADISRIRDGVGRVIFGQENVVERTLVALLAGGHALLV CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCEEEE GVPGLAKTKLVETLGVVLGLDSRRIQFTPDLMPSDILGSEVMEQDEIGKRSFRFISGPIF ECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLLMADEINRASPRTQSALLQAMQEYHVTIAGARYDLPAPFHVLATQNPLEQEGTYPLP HHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECEECCCCCEEEEECCCCCHHCCCCCCC EAQLDRFLMQVDILYPEIEAERRILLETTGIEDAKAQNVLQPARLKEIQTLIRRMPVPES HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHH VVEAILTLVRSARPGQGNAETDKHVAWGPGPRASQALMLCTRARALYDGRLAPSVDDVRA HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAEPVLQHRMALTFAARAEGTSVRDVVAKLVKGI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure SVMVKESPISETDMIAEAEKALADISRIRDGVGRVIFGQENVVERTLVALLAGGHALLV CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHCCCEEEE GVPGLAKTKLVETLGVVLGLDSRRIQFTPDLMPSDILGSEVMEQDEIGKRSFRFISGPIF ECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLLMADEINRASPRTQSALLQAMQEYHVTIAGARYDLPAPFHVLATQNPLEQEGTYPLP HHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECEECCCCCEEEEECCCCCHHCCCCCCC EAQLDRFLMQVDILYPEIEAERRILLETTGIEDAKAQNVLQPARLKEIQTLIRRMPVPES HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHH VVEAILTLVRSARPGQGNAETDKHVAWGPGPRASQALMLCTRARALYDGRLAPSVDDVRA HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAEPVLQHRMALTFAARAEGTSVRDVVAKLVKGI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]