| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472439
Identifier: 13472439
GI number: 13472439
Start: 2194231
End: 2197050
Strand: Direct
Name: 13472439
Synonym: mlr2734
Alternate gene names: NA
Gene position: 2194231-2197050 (Clockwise)
Preceding gene: 13472438
Following gene: 13472440
Centisome position: 31.19
GC content: 68.62
Gene sequence:
>2820_bases ATGAGCTGGCTGCCGCTCTCCTTTGGCGCTCCCATGGTGCTGTGGGGCCTGCTGGCGCTGCCGGTGATCTGGTGGCTGCT CAGGCTGACCCCGCCCAAGCCGCAGGCCGAGATCTTCCCGCCGCTGAAGATCCTGGCGCGCGTCTTGAAGCGCGAGGAGA CGCCGCATCAAAGCCCCTGGTGGCTGACGCTGCTCAGGCTGCTGATGGCGGGCCTCATCGTCGCCGCCCTTGCCGAACCG GTCTTCAACCCGCGCGAAAAACTACCGGCCGAGGGTGCAGCCCTTGCGCTGGTCATCGACAATGACTGGGCAAGTGCTGC CGACTGGAACAAGCGCGTCGCTACCGCCGAGCGGCTGATCAAGGATGCCGGCTCGAACGGCGTGCCGGTCATCATCGCGT TCACCGCCGAAAAACCCAATGCGGAGATCGGTCCCTTCGATGCCGCCGCCGCACTCGACCGGTTGCGCGCCGCCAAGCCG CGCCCGATCCCGACCGACCGGCCCGCCGTCTATGCCCGCGTCGCCGGCGTGCTGGAGACCTTGCGCGGCGCCAGCGTCGC CGTGTTGGCCGATGGCCTCGCGGCCAAAGGCGACGAGGCCGCTTTCAAAACGCTGTTGTCGAAGAATGCGGCACGCGTGG TTTGGGCTACCGCCGATCGGCTTTCGCTGACCGGCCTCACCGCCGCCGACAACCAGGTCGACGGTTTTGCGCTTACCGCC ATCCGCGTGCCGGGCGATCCGGCGCCGGCACAGGTCACCGCCGGCGCCTTCGACGACAAGGGCCGCCGCATCGCCGATGC GACGCTGACCTTCGCGCCCGGCGAAGCCACCGCCACCAGCACCATGGCGGTGCCGTTCGAGCTGCGCAACGACTTTGCCT CGATTGCCCTCGACGGCGAACGCCAGGCGGGTGCGGTGCGCGTGCTCGACGAAAGCTCCAAGCGCCGCCGCGTCGGATTG CTGTCGCAGGCCGAGGCCGACCAGGCGCAGCCGCTTCTGTCGCCGCTCTACTACATCAGGCGCGCGCTGCAGCCCTTCGC CGATCTGGTCGAACCCTCCAGCGCCGACCTCGCCGACGCCATCCCGCAGATCCTCGACCAGAAGCCGGCGATGATCATCA TGGCCGACATCGGCACCATTCCGGCGCAGGTTCGACAGCGGTTGGTCGACTGGGTCGACAATGGCGGGACGCTTGTGCGT TTCGCCGGCTCGCGGCTGGCCGCCGCCGGCAATGACGACGATCTGCTGCCGGTTCGCCTGCGCACCGGCGAACGTTCGCT CGGCGGCGCGCTGTCCTGGACCTCGCCGCAGCCGGTCACCGAATTCCCCAAGGCCGGTCCCTTCGCCGATCTGGCGCCGC CCACGGAAGTTACCGTGAGCAGGCAGGTGCTGGCCGAACCGACGCCCGATATCGTCGAGCGCACCTGGGCCGCGCTCGCC GATGGCACGCCACTGGTCACCGGGCTGAAGAAAGGCAAGGGCACGCTGGTGCTGTTCCATGTCACGCCCGAAGCGACCTG GTCGAACCTGCCGATCTCGGGCAGCTTCGTCGAGATGCTGCGCCGCATCGTGCAGCTGTCGCGCAACCAGGGCGCGGCGA TCGCCAATGCCGAAGCCGCCGCCACGTCGCTGGCACCCTACCGCATGATCGCGGCCGACGGCTCGCTGGTGCCGCCGACG CCGGATGCACGGCCGCTGGTGCCGGGCGCCGGCGTGCCGGTGACCTTCGAGAACCCGCCCGGCCTCTACGGCTCGGAAAC CGGCGTCTTCGCCCACAATTTGCTGGACGCCGCAAGCACGTTCGTGCCGCTGGCGCGCCCGCAATTCACGGTTCCGGTCA CCACGATCCAGTACGCCTTCGATGAATCCCGCAATCTGAAAGGTTCGCTGGTCATCGCCGCCCTGGTGCTGATGCTGCTC GACACGCTGGCGGTGTTCTGGATGGGCGGCCTGTTCTCGCGCCGGCGGCGCCGTGCCGGCGCCGTGGCCACCACCGCGGC TGTCCTGATCGCGCTTGGCGCATTGTTCGGCCATGCCGATTTCGCCCGCGCCGACGATGCCAAGCCGGGCGACGAGGCGG CCATCTCTGCGATTTCGAAGACCCGCATCGCCTATGTGCTGACCGGCGTGCCGGGCGACGATTCGATCAGCCGCGCCGGG CTCGAGGGCCTGACCCGCTTCCTGATCGAGAAGACCGCGCTGGAACCGGGCGCGCCTGCCGGCGTCGACATCGCGAAGGA CGAACTGTCCTTCTATCCTCTGATCTATTGGCCGATCGATCCGGCCGCGCCGATGCCGAGCCAGGCCGCGATCGCCCGCA TCGACGCCTATATGCAGCAGGGCGGCACGGTGCTGTTCGACACGCGCGACCAGTTCGCCAACGGCATCGGCGCCGATTCC ACCAGCCCGGCGACCGAGCGGCTGCGCGACATCCTCGGCAACCTCAACGTGCCGCCGCTGGAGCCGGTGCCGTCGGACCA CGTGCTGACCAAGTCCTTCTTCATCCTGCCGGAGTTCCCCGGCCGCTTCGCCGGCAGCCCGCTCTGGGTCGAGGCCTCGC TCGACGCCAGCAATGCCGACAACCGGCCGGTGCGCACCGGCGACGGCGTCTCGCCGATCATGATCACTGCCAATGATTTC GCCGGCGCCTGGGCGGTCGACGAGAATGGCGACCCACTGCTGCCGACGGTGCCAGCCGACCCGATGCAGCGCGTCTACGC GCTGCGTGCCGGCGTCAACATCATGATGTATATGCTGACCGGCAACTACAAATCCGACCAGGTGCATGTCCCCATTCTGC TCGAACGGCTGGGGCAGTAA
Upstream 100 bases:
>100_bases TGGCGTCCGACGCGCTGGTGCGCCTGCATATGGCAATGACGGCCGATGGCGGCTATGCCGGTAGCGGTCGTACCGGTCAG CCTGGAAAGGCGGTCGGCGC
Downstream 100 bases:
>100_bases CCAATGAACTGGTCGATCTCCTTCGAACCGCTGATCTCCTGGCCGCTGCTGGCCCTCGTGCTGGTGCCGCTGGCGCTGCT GGCGCTTATCGGCCTGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 939; Mature: 938
Protein sequence:
>939_residues MSWLPLSFGAPMVLWGLLALPVIWWLLRLTPPKPQAEIFPPLKILARVLKREETPHQSPWWLTLLRLLMAGLIVAALAEP VFNPREKLPAEGAALALVIDNDWASAADWNKRVATAERLIKDAGSNGVPVIIAFTAEKPNAEIGPFDAAAALDRLRAAKP RPIPTDRPAVYARVAGVLETLRGASVAVLADGLAAKGDEAAFKTLLSKNAARVVWATADRLSLTGLTAADNQVDGFALTA IRVPGDPAPAQVTAGAFDDKGRRIADATLTFAPGEATATSTMAVPFELRNDFASIALDGERQAGAVRVLDESSKRRRVGL LSQAEADQAQPLLSPLYYIRRALQPFADLVEPSSADLADAIPQILDQKPAMIIMADIGTIPAQVRQRLVDWVDNGGTLVR FAGSRLAAAGNDDDLLPVRLRTGERSLGGALSWTSPQPVTEFPKAGPFADLAPPTEVTVSRQVLAEPTPDIVERTWAALA DGTPLVTGLKKGKGTLVLFHVTPEATWSNLPISGSFVEMLRRIVQLSRNQGAAIANAEAAATSLAPYRMIAADGSLVPPT PDARPLVPGAGVPVTFENPPGLYGSETGVFAHNLLDAASTFVPLARPQFTVPVTTIQYAFDESRNLKGSLVIAALVLMLL DTLAVFWMGGLFSRRRRRAGAVATTAAVLIALGALFGHADFARADDAKPGDEAAISAISKTRIAYVLTGVPGDDSISRAG LEGLTRFLIEKTALEPGAPAGVDIAKDELSFYPLIYWPIDPAAPMPSQAAIARIDAYMQQGGTVLFDTRDQFANGIGADS TSPATERLRDILGNLNVPPLEPVPSDHVLTKSFFILPEFPGRFAGSPLWVEASLDASNADNRPVRTGDGVSPIMITANDF AGAWAVDENGDPLLPTVPADPMQRVYALRAGVNIMMYMLTGNYKSDQVHVPILLERLGQ
Sequences:
>Translated_939_residues MSWLPLSFGAPMVLWGLLALPVIWWLLRLTPPKPQAEIFPPLKILARVLKREETPHQSPWWLTLLRLLMAGLIVAALAEP VFNPREKLPAEGAALALVIDNDWASAADWNKRVATAERLIKDAGSNGVPVIIAFTAEKPNAEIGPFDAAAALDRLRAAKP RPIPTDRPAVYARVAGVLETLRGASVAVLADGLAAKGDEAAFKTLLSKNAARVVWATADRLSLTGLTAADNQVDGFALTA IRVPGDPAPAQVTAGAFDDKGRRIADATLTFAPGEATATSTMAVPFELRNDFASIALDGERQAGAVRVLDESSKRRRVGL LSQAEADQAQPLLSPLYYIRRALQPFADLVEPSSADLADAIPQILDQKPAMIIMADIGTIPAQVRQRLVDWVDNGGTLVR FAGSRLAAAGNDDDLLPVRLRTGERSLGGALSWTSPQPVTEFPKAGPFADLAPPTEVTVSRQVLAEPTPDIVERTWAALA DGTPLVTGLKKGKGTLVLFHVTPEATWSNLPISGSFVEMLRRIVQLSRNQGAAIANAEAAATSLAPYRMIAADGSLVPPT PDARPLVPGAGVPVTFENPPGLYGSETGVFAHNLLDAASTFVPLARPQFTVPVTTIQYAFDESRNLKGSLVIAALVLMLL DTLAVFWMGGLFSRRRRRAGAVATTAAVLIALGALFGHADFARADDAKPGDEAAISAISKTRIAYVLTGVPGDDSISRAG LEGLTRFLIEKTALEPGAPAGVDIAKDELSFYPLIYWPIDPAAPMPSQAAIARIDAYMQQGGTVLFDTRDQFANGIGADS TSPATERLRDILGNLNVPPLEPVPSDHVLTKSFFILPEFPGRFAGSPLWVEASLDASNADNRPVRTGDGVSPIMITANDF AGAWAVDENGDPLLPTVPADPMQRVYALRAGVNIMMYMLTGNYKSDQVHVPILLERLGQ >Mature_938_residues SWLPLSFGAPMVLWGLLALPVIWWLLRLTPPKPQAEIFPPLKILARVLKREETPHQSPWWLTLLRLLMAGLIVAALAEPV FNPREKLPAEGAALALVIDNDWASAADWNKRVATAERLIKDAGSNGVPVIIAFTAEKPNAEIGPFDAAAALDRLRAAKPR PIPTDRPAVYARVAGVLETLRGASVAVLADGLAAKGDEAAFKTLLSKNAARVVWATADRLSLTGLTAADNQVDGFALTAI RVPGDPAPAQVTAGAFDDKGRRIADATLTFAPGEATATSTMAVPFELRNDFASIALDGERQAGAVRVLDESSKRRRVGLL SQAEADQAQPLLSPLYYIRRALQPFADLVEPSSADLADAIPQILDQKPAMIIMADIGTIPAQVRQRLVDWVDNGGTLVRF AGSRLAAAGNDDDLLPVRLRTGERSLGGALSWTSPQPVTEFPKAGPFADLAPPTEVTVSRQVLAEPTPDIVERTWAALAD GTPLVTGLKKGKGTLVLFHVTPEATWSNLPISGSFVEMLRRIVQLSRNQGAAIANAEAAATSLAPYRMIAADGSLVPPTP DARPLVPGAGVPVTFENPPGLYGSETGVFAHNLLDAASTFVPLARPQFTVPVTTIQYAFDESRNLKGSLVIAALVLMLLD TLAVFWMGGLFSRRRRRAGAVATTAAVLIALGALFGHADFARADDAKPGDEAAISAISKTRIAYVLTGVPGDDSISRAGL EGLTRFLIEKTALEPGAPAGVDIAKDELSFYPLIYWPIDPAAPMPSQAAIARIDAYMQQGGTVLFDTRDQFANGIGADST SPATERLRDILGNLNVPPLEPVPSDHVLTKSFFILPEFPGRFAGSPLWVEASLDASNADNRPVRTGDGVSPIMITANDFA GAWAVDENGDPLLPTVPADPMQRVYALRAGVNIMMYMLTGNYKSDQVHVPILLERLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99991; Mature: 99859
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLPLSFGAPMVLWGLLALPVIWWLLRLTPPKPQAEIFPPLKILARVLKREETPHQSPW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH WLTLLRLLMAGLIVAALAEPVFNPREKLPAEGAALALVIDNDWASAADWNKRVATAERLI HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH KDAGSNGVPVIIAFTAEKPNAEIGPFDAAAALDRLRAAKPRPIPTDRPAVYARVAGVLET HHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LRGASVAVLADGLAAKGDEAAFKTLLSKNAARVVWATADRLSLTGLTAADNQVDGFALTA HCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEE IRVPGDPAPAQVTAGAFDDKGRRIADATLTFAPGEATATSTMAVPFELRNDFASIALDGE EECCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEHHHHCCCEEEEECCC RQAGAVRVLDESSKRRRVGLLSQAEADQAQPLLSPLYYIRRALQPFADLVEPSSADLADA CCCCEEEEECCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IPQILDQKPAMIIMADIGTIPAQVRQRLVDWVDNGGTLVRFAGSRLAAAGNDDDLLPVRL HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEEE RTGERSLGGALSWTSPQPVTEFPKAGPFADLAPPTEVTVSRQVLAEPTPDIVERTWAALA ECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHC DGTPLVTGLKKGKGTLVLFHVTPEATWSNLPISGSFVEMLRRIVQLSRNQGAAIANAEAA CCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHH ATSLAPYRMIAADGSLVPPTPDARPLVPGAGVPVTFENPPGLYGSETGVFAHNLLDAAST HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH FVPLARPQFTVPVTTIQYAFDESRNLKGSLVIAALVLMLLDTLAVFWMGGLFSRRRRRAG HCCCCCCCEEEEHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AVATTAAVLIALGALFGHADFARADDAKPGDEAAISAISKTRIAYVLTGVPGDDSISRAG HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHH LEGLTRFLIEKTALEPGAPAGVDIAKDELSFYPLIYWPIDPAAPMPSQAAIARIDAYMQQ HHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC GGTVLFDTRDQFANGIGADSTSPATERLRDILGNLNVPPLEPVPSDHVLTKSFFILPEFP CCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCC GRFAGSPLWVEASLDASNADNRPVRTGDGVSPIMITANDFAGAWAVDENGDPLLPTVPAD CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC PMQRVYALRAGVNIMMYMLTGNYKSDQVHVPILLERLGQ HHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHHCC >Mature Secondary Structure SWLPLSFGAPMVLWGLLALPVIWWLLRLTPPKPQAEIFPPLKILARVLKREETPHQSPW CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCH WLTLLRLLMAGLIVAALAEPVFNPREKLPAEGAALALVIDNDWASAADWNKRVATAERLI HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH KDAGSNGVPVIIAFTAEKPNAEIGPFDAAAALDRLRAAKPRPIPTDRPAVYARVAGVLET HHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH LRGASVAVLADGLAAKGDEAAFKTLLSKNAARVVWATADRLSLTGLTAADNQVDGFALTA HCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEE IRVPGDPAPAQVTAGAFDDKGRRIADATLTFAPGEATATSTMAVPFELRNDFASIALDGE EECCCCCCCCEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEHHHHCCCEEEEECCC RQAGAVRVLDESSKRRRVGLLSQAEADQAQPLLSPLYYIRRALQPFADLVEPSSADLADA CCCCEEEEECCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IPQILDQKPAMIIMADIGTIPAQVRQRLVDWVDNGGTLVRFAGSRLAAAGNDDDLLPVRL HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEEE RTGERSLGGALSWTSPQPVTEFPKAGPFADLAPPTEVTVSRQVLAEPTPDIVERTWAALA ECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHC DGTPLVTGLKKGKGTLVLFHVTPEATWSNLPISGSFVEMLRRIVQLSRNQGAAIANAEAA CCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHH ATSLAPYRMIAADGSLVPPTPDARPLVPGAGVPVTFENPPGLYGSETGVFAHNLLDAAST HHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH FVPLARPQFTVPVTTIQYAFDESRNLKGSLVIAALVLMLLDTLAVFWMGGLFSRRRRRAG HCCCCCCCEEEEHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AVATTAAVLIALGALFGHADFARADDAKPGDEAAISAISKTRIAYVLTGVPGDDSISRAG HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHH LEGLTRFLIEKTALEPGAPAGVDIAKDELSFYPLIYWPIDPAAPMPSQAAIARIDAYMQQ HHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC GGTVLFDTRDQFANGIGADSTSPATERLRDILGNLNVPPLEPVPSDHVLTKSFFILPEFP CCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCC GRFAGSPLWVEASLDASNADNRPVRTGDGVSPIMITANDFAGAWAVDENGDPLLPTVPAD CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCC PMQRVYALRAGVNIMMYMLTGNYKSDQVHVPILLERLGQ HHHHHHHHHHCCEEEEEEEECCCCCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA