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The map label for this gene is petB [H]

Identifier: 13472418

GI number: 13472418

Start: 2175948

End: 2177249

Strand: Reverse

Name: petB [H]

Synonym: mll2706

Alternate gene names: 13472418

Gene position: 2177249-2175948 (Counterclockwise)

Preceding gene: 13472419

Following gene: 13472417

Centisome position: 30.94

GC content: 61.83

Gene sequence:

>1302_bases
ATGAGCGAGGGACACTCGACCTATACGCCCAAGACCGGTATCGAACGCTGGTTCGACGCCCGCATGCCGCTGCCGCGGAT
GGTCTACGACAGCTTCATCGCCTATCCGGTGCCGCGCAACCTCAACTATGCCTGGACCTTCGGCGGCATCCTGGCGATCA
TGCTGACGGCGCAAATCCTGACCGGCATCGTGCTGGCCATGCACTATACGGCCGACACCAATCTCGCCTTCGGCTCCGTC
GAAAAGATCATGCGTGACGTCAATTCCGGCTGGCTGTTGCGCTACATGCATGCCAACGGCGCCTCGTTCTTCTTCATCGC
TGTCTATATCCACATCTTCCGCGGCCTCTATTACGGCTCCTACAAGGCGCCGCGTGAGTTGCTGTGGATCCTGGGCTGCA
TCATCTATCTGCTGATGATGGCGACCGGCTTCATGGGCTATGTGCTGCCATGGGGGCAGATGAGCTTCTGGGGCGCCACC
GTCATCACCGGCTTCTTCAGCGCCATTCCGCTGATCGGTGACTGGATCCAGCAGCTGCTGCTTGGCGGCTTTGCCGTCGA
CAATCCGACGCTGAACCGCTTCTTCGCGCTGCACTACCTCTTGCCGTTCATGATTGCCGGCGTCGTCGTTCTGCACGTCT
GGGCGCTGCATGTGGTGGGCCAGTCGAACCCGACCGGCATCGAGGTCAAGTCGAAGACCGACACCGTCGCCTTCACCCCC
TACGCGACCATCAAGGACGCGTTCGGCATGATCGTGTTCCTGTTCTTCTTCGCCTATTTCGTCTTCTACCTGCCAAACTA
TCTCGGCCATCCGGACAACTACACGGTCGCCAACCCGCTGAAGACCCCGGCCCATATCGTTCCGGAATGGTACTTCCTGC
CGTTCTACGCGATCCTGCGCGCCATCACCTTCAACATCGGGCCGATCAATTCCAAGCTCGGCGGCGTGCTGTGCATGTTC
GGCGCCATCGCCATGCTGTTCCTGGTGCCGTGGCTCGACACCTCCAAGGTGCGCTCGGCGGTCTACCGGCCCTGGTACAA
GCTGTTCTTCTGGCTGTTCGTGGCCGATGCCATCCTGCTGGGCTGGCTGGGCTCGCAGCCGGCGGAAGGCAGCTATGTGT
TCATGGCGCAGATGGCGACGCTGTTCTACTTCGCCTTCTTCCTGGTCGCGCTGCCGGTGCTCGGCCTGATCGAGACGCCG
CGCAGGCTGCCGAACTCGATCACCGAGGCGGTGCTCGAAAAGAACAAGGGCGGCAGCGGGCATCCGGCGGGCGCCACGGC
CGCGCCAGAGACCAAGGGCTGA

Upstream 100 bases:

>100_bases
CGCATCCGCAAAGGCCCGGCGCCGGAAAACATGGCTGTGCCGGTATTCAAATTCATTTCCGATACCAAGATCCTTATCGG
TTGAGGCAGGGGATATTTCG

Downstream 100 bases:

>100_bases
GCGGTAGAGAATCTAAGGGGATTTGGCATGAAAAAGATTCTCACCTCGCTGGCGCTGGTTGGCCTTGTGGCCGCCGGCAC
CGCAGCGTTCGCGGCCGAAG

Product: ubiquinol-cytochrome c reductase cytochrome b subunit

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSEGHSTYTPKTGIERWFDARMPLPRMVYDSFIAYPVPRNLNYAWTFGGILAIMLTAQILTGIVLAMHYTADTNLAFGSV
EKIMRDVNSGWLLRYMHANGASFFFIAVYIHIFRGLYYGSYKAPRELLWILGCIIYLLMMATGFMGYVLPWGQMSFWGAT
VITGFFSAIPLIGDWIQQLLLGGFAVDNPTLNRFFALHYLLPFMIAGVVVLHVWALHVVGQSNPTGIEVKSKTDTVAFTP
YATIKDAFGMIVFLFFFAYFVFYLPNYLGHPDNYTVANPLKTPAHIVPEWYFLPFYAILRAITFNIGPINSKLGGVLCMF
GAIAMLFLVPWLDTSKVRSAVYRPWYKLFFWLFVADAILLGWLGSQPAEGSYVFMAQMATLFYFAFFLVALPVLGLIETP
RRLPNSITEAVLEKNKGGSGHPAGATAAPETKG

Sequences:

>Translated_433_residues
MSEGHSTYTPKTGIERWFDARMPLPRMVYDSFIAYPVPRNLNYAWTFGGILAIMLTAQILTGIVLAMHYTADTNLAFGSV
EKIMRDVNSGWLLRYMHANGASFFFIAVYIHIFRGLYYGSYKAPRELLWILGCIIYLLMMATGFMGYVLPWGQMSFWGAT
VITGFFSAIPLIGDWIQQLLLGGFAVDNPTLNRFFALHYLLPFMIAGVVVLHVWALHVVGQSNPTGIEVKSKTDTVAFTP
YATIKDAFGMIVFLFFFAYFVFYLPNYLGHPDNYTVANPLKTPAHIVPEWYFLPFYAILRAITFNIGPINSKLGGVLCMF
GAIAMLFLVPWLDTSKVRSAVYRPWYKLFFWLFVADAILLGWLGSQPAEGSYVFMAQMATLFYFAFFLVALPVLGLIETP
RRLPNSITEAVLEKNKGGSGHPAGATAAPETKG
>Mature_432_residues
SEGHSTYTPKTGIERWFDARMPLPRMVYDSFIAYPVPRNLNYAWTFGGILAIMLTAQILTGIVLAMHYTADTNLAFGSVE
KIMRDVNSGWLLRYMHANGASFFFIAVYIHIFRGLYYGSYKAPRELLWILGCIIYLLMMATGFMGYVLPWGQMSFWGATV
ITGFFSAIPLIGDWIQQLLLGGFAVDNPTLNRFFALHYLLPFMIAGVVVLHVWALHVVGQSNPTGIEVKSKTDTVAFTPY
ATIKDAFGMIVFLFFFAYFVFYLPNYLGHPDNYTVANPLKTPAHIVPEWYFLPFYAILRAITFNIGPINSKLGGVLCMFG
AIAMLFLVPWLDTSKVRSAVYRPWYKLFFWLFVADAILLGWLGSQPAEGSYVFMAQMATLFYFAFFLVALPVLGLIETPR
RLPNSITEAVLEKNKGGSGHPAGATAAPETKG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=377, Percent_Identity=48.8063660477454, Blast_Score=346, Evalue=3e-95,
Organism=Saccharomyces cerevisiae, GI6226529, Length=373, Percent_Identity=51.4745308310992, Blast_Score=353, Evalue=3e-98,
Organism=Saccharomyces cerevisiae, GI6226532, Length=244, Percent_Identity=52.0491803278688, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6226531, Length=163, Percent_Identity=53.3742331288344, Blast_Score=173, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6226530, Length=147, Percent_Identity=48.9795918367347, Blast_Score=141, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 48585; Mature: 48454

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGHSTYTPKTGIERWFDARMPLPRMVYDSFIAYPVPRNLNYAWTFGGILAIMLTAQIL
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH
TGIVLAMHYTADTNLAFGSVEKIMRDVNSGWLLRYMHANGASFFFIAVYIHIFRGLYYGS
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
YKAPRELLWILGCIIYLLMMATGFMGYVLPWGQMSFWGATVITGFFSAIPLIGDWIQQLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGFAVDNPTLNRFFALHYLLPFMIAGVVVLHVWALHVVGQSNPTGIEVKSKTDTVAFTP
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECC
YATIKDAFGMIVFLFFFAYFVFYLPNYLGHPDNYTVANPLKTPAHIVPEWYFLPFYAILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
AITFNIGPINSKLGGVLCMFGAIAMLFLVPWLDTSKVRSAVYRPWYKLFFWLFVADAILL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWLGSQPAEGSYVFMAQMATLFYFAFFLVALPVLGLIETPRRLPNSITEAVLEKNKGGSG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHCCCCCCC
HPAGATAAPETKG
CCCCCCCCCCCCC
>Mature Secondary Structure 
SEGHSTYTPKTGIERWFDARMPLPRMVYDSFIAYPVPRNLNYAWTFGGILAIMLTAQIL
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH
TGIVLAMHYTADTNLAFGSVEKIMRDVNSGWLLRYMHANGASFFFIAVYIHIFRGLYYGS
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
YKAPRELLWILGCIIYLLMMATGFMGYVLPWGQMSFWGATVITGFFSAIPLIGDWIQQLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGFAVDNPTLNRFFALHYLLPFMIAGVVVLHVWALHVVGQSNPTGIEVKSKTDTVAFTP
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECC
YATIKDAFGMIVFLFFFAYFVFYLPNYLGHPDNYTVANPLKTPAHIVPEWYFLPFYAILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
AITFNIGPINSKLGGVLCMFGAIAMLFLVPWLDTSKVRSAVYRPWYKLFFWLFVADAILL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWLGSQPAEGSYVFMAQMATLFYFAFFLVALPVLGLIETPRRLPNSITEAVLEKNKGGSG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHCCCCCCC
HPAGATAAPETKG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2560136 [H]