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The map label for this gene is petA [H]

Identifier: 13472419

GI number: 13472419

Start: 2177266

End: 2177826

Strand: Reverse

Name: petA [H]

Synonym: mll2707

Alternate gene names: 13472419

Gene position: 2177826-2177266 (Counterclockwise)

Preceding gene: 13472423

Following gene: 13472418

Centisome position: 30.95

GC content: 63.99

Gene sequence:

>561_bases
GTGAGCGCAACCGATATCCACGATCCCAATCGTCGAGATTTTCTTTACGTCGCCACTGGCATGGCTGCCGTGGTCGGGGC
CGGGGCCGTCGCCTGGCCGTTCATCGACCAGATGCGCCCCGATGCCTCGACGCTGGCGCTCGCCTCGGTGGAAGTCGATG
TCGCCTCGCTGACGCCGGGCATGTCGCTGATCGTCAAGTGGCGGGGCAAGCCGGTCGTGGTGCGCAACCGCACCGAAAAG
GAAATGAAGGACGGCGAGGCCGTCAACCTCTCCGATCTCAAGGATCCGATCGCCCGCAACGCCAATCTGCCGGCCGATGC
GCCGGCGACCGACGCCAACCGCACCACGCCTGGCAAGGAAGCCTGGATGGTGATGGTTCAGGTCTGCACGCATCTGGGCT
GCATCCCGCTCGGCCAGGAAGGCGATTTCGGCGGCTGGTTCTGCCCGTGCCATGGCTCGCAGTACGACACCGCCGGCCGC
ATCCGCAAAGGCCCGGCGCCGGAAAACATGGCTGTGCCGGTATTCAAATTCATTTCCGATACCAAGATCCTTATCGGTTG
A

Upstream 100 bases:

>100_bases
AGTTCGCTAGCCTGTTCGCCATGCGCTGTCGGGTTGGCGTGATTGAGCGGGGAACAAGGCTCGGCCACCGGCGCGGAAGA
GGCGAAAGGATCAGGCACCC

Downstream 100 bases:

>100_bases
GGCAGGGGATATTTCGATGAGCGAGGGACACTCGACCTATACGCCCAAGACCGGTATCGAACGCTGGTTCGACGCCCGCA
TGCCGCTGCCGCGGATGGTC

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSATDIHDPNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEK
EMKDGEAVNLSDLKDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGSQYDTAGR
IRKGPAPENMAVPVFKFISDTKILIG

Sequences:

>Translated_186_residues
MSATDIHDPNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEK
EMKDGEAVNLSDLKDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGSQYDTAGR
IRKGPAPENMAVPVFKFISDTKILIG
>Mature_185_residues
SATDIHDPNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEKE
MKDGEAVNLSDLKDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGSQYDTAGRI
RKGPAPENMAVPVFKFISDTKILIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=179, Percent_Identity=41.8994413407821, Blast_Score=162, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17540418, Length=187, Percent_Identity=39.0374331550802, Blast_Score=139, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6320811, Length=173, Percent_Identity=45.0867052023121, Blast_Score=170, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24580896, Length=153, Percent_Identity=42.483660130719, Blast_Score=140, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19981; Mature: 19850

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATDIHDPNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLALASVEVDVASLTPG
CCCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHCCCCCHHEEEEEEEEEHHHCCCC
MSLIVKWRGKPVVVRNRTEKEMKDGEAVNLSDLKDPIARNANLPADAPATDANRTTPGKE
EEEEEEECCCEEEEECCCHHHHCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
AWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGSQYDTAGRIRKGPAPENMAVPVFKFISD
HHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
TKILIG
CEEEEC
>Mature Secondary Structure 
SATDIHDPNRRDFLYVATGMAAVVGAGAVAWPFIDQMRPDASTLALASVEVDVASLTPG
CCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHCCCCCHHEEEEEEEEEHHHCCCC
MSLIVKWRGKPVVVRNRTEKEMKDGEAVNLSDLKDPIARNANLPADAPATDANRTTPGKE
EEEEEEECCCEEEEECCCHHHHCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
AWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGSQYDTAGRIRKGPAPENMAVPVFKFISD
HHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
TKILIG
CEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176595; 2821272 [H]