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The map label for this gene is 13472359

Identifier: 13472359

GI number: 13472359

Start: 2123510

End: 2126215

Strand: Reverse

Name: 13472359

Synonym: mll2627

Alternate gene names: NA

Gene position: 2126215-2123510 (Counterclockwise)

Preceding gene: 13472360

Following gene: 13472358

Centisome position: 30.22

GC content: 64.26

Gene sequence:

>2706_bases
ATGACGGCTGTTGTATCGACCTCTCGACCAAGCATCACCTCGCTTGAGGCGCCTCGGCTCGCGCATTACCTCGCGGTCGG
GCTGATCGCCGGCGCCATCATCGCGCTGCAGATCGCTATCATGCGTGTGTTCGCGGTCGGCAGCTGGTCGCATTTCGGTT
CGCTGGTGGTCAGCCTCGCCATGCTAGGCTTCTCGCTGTCCAGCGTCGTCATCTTCGCCGGCAAGGGCTGGTTCGACCGC
CATTGGCAAGGGGCGGCCACCGCGGCCCTGCTGCTGATCGGCCCGCTCGCCGTCGGCTCCAACCTCGTCGCCCAGACAGT
GCCGTTCAACGCCATCTTCCTGGTGTCCGACCCGGCGCAGAAATGGCGGCTGCTCGCCAATTTCCTGCTCTATCTCCTGC
CGTTCCTGGCCGGCGCGTTCTTCCTCGGCATCGTCTTCCTGAAAAGCCGCACCGCCTTCGGCCGTGTCTATTTCGCCGAC
CTCACCGGTTCGGGGCTCGCCGGCCTCGCCGTGCTGGTGTCGCTCTATCTGTTCGCGCCTGAAACCATCATCGTCGTGCC
GCTCCTGCTTTGGGCCGCAGGTTCAATCCTGTGGTTCCTGGCTTTCGGCGCCTGGAAGAGCGTCGTCGCCGGCGTCGTGG
TCGCGGCGCTGTCGATATCAGGCTACCTCATGCTGCCCGGCTTGCTCGGCATCCCCGACATTGCCGTGTCGCAATACAAG
GGCGTCGCCTATGCCCGCAACTTTCCGGACGGCAAGCGCATCTACCGCAGCGTCTCGCCCTTCGGCGATCTGCAGGTCTA
TGCCAGTTCCTACATGCATTTCGCGCCGGGCCTGAGCGACAATGCCGCCTTCGGCATGCCCGAAGTGCCGGCCAACACCT
ATGTCGGCATGTACCGCGACGGCGACGGGCCGGAAGGCATCATGCGCAATCTGGCGCCGGCCGAGCAGCTCTATTTCCGC
TATCTGCCAATGCACTATCCCTATGTCATCAAGGACAAGCCCAAGACATTCGTCGTGCAGTTCGGCGGCGGCATCTCCAC
GCAGGCCGCGCTCAATGCCGGTTCGACCTCGGTGACCGTCGCCGAGAGCAATCCGATGACCTTGCGGGCGTTCCGCGATC
CGGTGCTGAAGGATGTCACCGGCGATATCCTGGCCGAGCCGCGGCTCAAGGTCATCGACTATGATGGGCGCCTGTTCCTC
GCCAACACGAGGGAGCGCTACGATGTCATCGACCTCAGCCTCGCCGACAGTGTCGGCCTGTCCAATCCCGGCGGCTTCGC
CATCTCGGAAAAATATGCCTACACGCGCGAAGCGATGCTGAGCTACATGCATGCGCTGGCCGATGGCGGTGTGCTGTCGA
TCACCTTGTGGAACAAGGAAGAGCCGCCGAAATCGGTCCTGAAGCTCTATTCGACCGTCGCCGAAGCGGCGAGGACCTTC
GACAGCCAAGGTGCGGCCAACGACATCTTCGCCGTCTCGAGTTACCTCTCGACCACGACCGTATTGTTCAAGCGCGGCGG
CTTCACCGAGGCCGAAATCAAGACGCTGCGCGACTACACCAAGTCGATGTCCTGGGAGGAAGTCTATTATCCGGGAATGA
CCTATGACGGCTCGGGCGCGCAAAAGGTTCTCGATGATTATCGCGCCTCTATCTTCGGCAGCGGACAGGACGCGACGCTG
ACGCAGCCGGCCTCCGGTGCGACCGCGCCTGCCGACCCGACCGCCCCAGCTAACCCCGACTGCGATCCGACGGCGCCGGC
CGATCCGACGCTCGACGCCTGTGCGGGCGCCGGCGGCGATACCGGCCCGCAAGTGTTGCCGGCGACGGAACTGCAGCGCA
TGACCTGGCACGCGCTTCTGACCGGCGGCTGGGAAAAACTTGCCGGCGACTACGTCTTCGACGCCCGGGCGCTCAGCAAC
GACCAGCCTTATTTCGCCGCCTATGTGAAGGTCGCCGATTTGCCGCGCACGTTGGACCGGCTCGACCTGTTCCAGGACGA
TTGGGGCTATCTCTTGATCTGGGCGACGCTCGGCATTGCCTGCATTGCGGCGGCGTCGCTGGTGCTGCTGCCGGTCATCT
TCGGCTGGCGCATCGTGTTCTCGCGCTCGCGCGGCAAGCTCGGCACCATCCTCTATTTCGCCTGTCTCGGCCTCGGCTAC
ATCATGGTCGAGGTCGGGCTGATCAGCCGCTTCACCGTGGCGCTGGCCAACCCGACGGTGTCGGCCTCGGTGCTGATCTC
CTCGATGCTGGTGTTTTCAGGCCTCGGCAGCCTGTTTGCCGAGCACATCTTCGAACGCGCCAGGACTCTGCTGCCCATAG
TGCTGCTGTCTGTCTGCGGGCTGCTGCTCGCCTACGGCTTCTATCTGTCGCCGGTGCTCGACCGGATCGGCGCCTATCCC
TATGCGGTGCGCCTGCTGCTCTGCTTTCTCCTGGTGTCGCCGCCGGCCTTCCTGATGGGCATGCCGATGGCCACCGCCAT
GACCTGGCTGGCGCGGCTCGGCAAGGAGCATCTGTTCGTCTGGGCCTGGGGCATCAATGGCTGTTTCTCGGTCATCGGCT
CGGCCGCCGTGCCGATCGTCGCCACCAGCTTCGGCTTAAGCGCCGTGTTGCAATGGGCGGCGATTGCCTATCTCATCGCC
ATTCCGGCCTTCTTCGCCGTGCTGTTGCCATCCAGGGCGCCGTCCATCCGGCTGGTAGCGGCCTGA

Upstream 100 bases:

>100_bases
TTCGTGCCGTTCACCAAGCTGGAAGGCGACCAGATCGTCGGCACGCACAACAGCTGAGTTGCCGTGCTGTCGGGCTAAGC
CGCCGCATCAAGGGGCCTGA

Downstream 100 bases:

>100_bases
TGCCGGACCGGCGCGCCATCGTCGCCGGATTGCTGGCCACGGCGATGTTTCCGGTGGCCAGCCAGGGGGCGCGCTTGCGC
AAGGCCATCTCGACCATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Spermidine Synthase; Spermidine Synthase-Like

Number of amino acids: Translated: 901; Mature: 900

Protein sequence:

>901_residues
MTAVVSTSRPSITSLEAPRLAHYLAVGLIAGAIIALQIAIMRVFAVGSWSHFGSLVVSLAMLGFSLSSVVIFAGKGWFDR
HWQGAATAALLLIGPLAVGSNLVAQTVPFNAIFLVSDPAQKWRLLANFLLYLLPFLAGAFFLGIVFLKSRTAFGRVYFAD
LTGSGLAGLAVLVSLYLFAPETIIVVPLLLWAAGSILWFLAFGAWKSVVAGVVVAALSISGYLMLPGLLGIPDIAVSQYK
GVAYARNFPDGKRIYRSVSPFGDLQVYASSYMHFAPGLSDNAAFGMPEVPANTYVGMYRDGDGPEGIMRNLAPAEQLYFR
YLPMHYPYVIKDKPKTFVVQFGGGISTQAALNAGSTSVTVAESNPMTLRAFRDPVLKDVTGDILAEPRLKVIDYDGRLFL
ANTRERYDVIDLSLADSVGLSNPGGFAISEKYAYTREAMLSYMHALADGGVLSITLWNKEEPPKSVLKLYSTVAEAARTF
DSQGAANDIFAVSSYLSTTTVLFKRGGFTEAEIKTLRDYTKSMSWEEVYYPGMTYDGSGAQKVLDDYRASIFGSGQDATL
TQPASGATAPADPTAPANPDCDPTAPADPTLDACAGAGGDTGPQVLPATELQRMTWHALLTGGWEKLAGDYVFDARALSN
DQPYFAAYVKVADLPRTLDRLDLFQDDWGYLLIWATLGIACIAAASLVLLPVIFGWRIVFSRSRGKLGTILYFACLGLGY
IMVEVGLISRFTVALANPTVSASVLISSMLVFSGLGSLFAEHIFERARTLLPIVLLSVCGLLLAYGFYLSPVLDRIGAYP
YAVRLLLCFLLVSPPAFLMGMPMATAMTWLARLGKEHLFVWAWGINGCFSVIGSAAVPIVATSFGLSAVLQWAAIAYLIA
IPAFFAVLLPSRAPSIRLVAA

Sequences:

>Translated_901_residues
MTAVVSTSRPSITSLEAPRLAHYLAVGLIAGAIIALQIAIMRVFAVGSWSHFGSLVVSLAMLGFSLSSVVIFAGKGWFDR
HWQGAATAALLLIGPLAVGSNLVAQTVPFNAIFLVSDPAQKWRLLANFLLYLLPFLAGAFFLGIVFLKSRTAFGRVYFAD
LTGSGLAGLAVLVSLYLFAPETIIVVPLLLWAAGSILWFLAFGAWKSVVAGVVVAALSISGYLMLPGLLGIPDIAVSQYK
GVAYARNFPDGKRIYRSVSPFGDLQVYASSYMHFAPGLSDNAAFGMPEVPANTYVGMYRDGDGPEGIMRNLAPAEQLYFR
YLPMHYPYVIKDKPKTFVVQFGGGISTQAALNAGSTSVTVAESNPMTLRAFRDPVLKDVTGDILAEPRLKVIDYDGRLFL
ANTRERYDVIDLSLADSVGLSNPGGFAISEKYAYTREAMLSYMHALADGGVLSITLWNKEEPPKSVLKLYSTVAEAARTF
DSQGAANDIFAVSSYLSTTTVLFKRGGFTEAEIKTLRDYTKSMSWEEVYYPGMTYDGSGAQKVLDDYRASIFGSGQDATL
TQPASGATAPADPTAPANPDCDPTAPADPTLDACAGAGGDTGPQVLPATELQRMTWHALLTGGWEKLAGDYVFDARALSN
DQPYFAAYVKVADLPRTLDRLDLFQDDWGYLLIWATLGIACIAAASLVLLPVIFGWRIVFSRSRGKLGTILYFACLGLGY
IMVEVGLISRFTVALANPTVSASVLISSMLVFSGLGSLFAEHIFERARTLLPIVLLSVCGLLLAYGFYLSPVLDRIGAYP
YAVRLLLCFLLVSPPAFLMGMPMATAMTWLARLGKEHLFVWAWGINGCFSVIGSAAVPIVATSFGLSAVLQWAAIAYLIA
IPAFFAVLLPSRAPSIRLVAA
>Mature_900_residues
TAVVSTSRPSITSLEAPRLAHYLAVGLIAGAIIALQIAIMRVFAVGSWSHFGSLVVSLAMLGFSLSSVVIFAGKGWFDRH
WQGAATAALLLIGPLAVGSNLVAQTVPFNAIFLVSDPAQKWRLLANFLLYLLPFLAGAFFLGIVFLKSRTAFGRVYFADL
TGSGLAGLAVLVSLYLFAPETIIVVPLLLWAAGSILWFLAFGAWKSVVAGVVVAALSISGYLMLPGLLGIPDIAVSQYKG
VAYARNFPDGKRIYRSVSPFGDLQVYASSYMHFAPGLSDNAAFGMPEVPANTYVGMYRDGDGPEGIMRNLAPAEQLYFRY
LPMHYPYVIKDKPKTFVVQFGGGISTQAALNAGSTSVTVAESNPMTLRAFRDPVLKDVTGDILAEPRLKVIDYDGRLFLA
NTRERYDVIDLSLADSVGLSNPGGFAISEKYAYTREAMLSYMHALADGGVLSITLWNKEEPPKSVLKLYSTVAEAARTFD
SQGAANDIFAVSSYLSTTTVLFKRGGFTEAEIKTLRDYTKSMSWEEVYYPGMTYDGSGAQKVLDDYRASIFGSGQDATLT
QPASGATAPADPTAPANPDCDPTAPADPTLDACAGAGGDTGPQVLPATELQRMTWHALLTGGWEKLAGDYVFDARALSND
QPYFAAYVKVADLPRTLDRLDLFQDDWGYLLIWATLGIACIAAASLVLLPVIFGWRIVFSRSRGKLGTILYFACLGLGYI
MVEVGLISRFTVALANPTVSASVLISSMLVFSGLGSLFAEHIFERARTLLPIVLLSVCGLLLAYGFYLSPVLDRIGAYPY
AVRLLLCFLLVSPPAFLMGMPMATAMTWLARLGKEHLFVWAWGINGCFSVIGSAAVPIVATSFGLSAVLQWAAIAYLIAI
PAFFAVLLPSRAPSIRLVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96779; Mature: 96648

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVVSTSRPSITSLEAPRLAHYLAVGLIAGAIIALQIAIMRVFAVGSWSHFGSLVVSLA
CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MLGFSLSSVVIFAGKGWFDRHWQGAATAALLLIGPLAVGSNLVAQTVPFNAIFLVSDPAQ
HHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCHHH
KWRLLANFLLYLLPFLAGAFFLGIVFLKSRTAFGRVYFADLTGSGLAGLAVLVSLYLFAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCCHHHHHHHHHHHHHCC
ETIIVVPLLLWAAGSILWFLAFGAWKSVVAGVVVAALSISGYLMLPGLLGIPDIAVSQYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHC
GVAYARNFPDGKRIYRSVSPFGDLQVYASSYMHFAPGLSDNAAFGMPEVPANTYVGMYRD
CCCEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
GDGPEGIMRNLAPAEQLYFRYLPMHYPYVIKDKPKTFVVQFGGGISTQAALNAGSTSVTV
CCCHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEE
AESNPMTLRAFRDPVLKDVTGDILAEPRLKVIDYDGRLFLANTRERYDVIDLSLADSVGL
ECCCCCEEHHHHCHHHHHCCHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEEECCCCCC
SNPGGFAISEKYAYTREAMLSYMHALADGGVLSITLWNKEEPPKSVLKLYSTVAEAARTF
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DSQGAANDIFAVSSYLSTTTVLFKRGGFTEAEIKTLRDYTKSMSWEEVYYPGMTYDGSGA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCH
QKVLDDYRASIFGSGQDATLTQPASGATAPADPTAPANPDCDPTAPADPTLDACAGAGGD
HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
TGPQVLPATELQRMTWHALLTGGWEKLAGDYVFDARALSNDQPYFAAYVKVADLPRTLDR
CCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHCCCCCCCEEEEEEHHHHHHHHHH
LDLFQDDWGYLLIWATLGIACIAAASLVLLPVIFGWRIVFSRSRGKLGTILYFACLGLGY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
IMVEVGLISRFTVALANPTVSASVLISSMLVFSGLGSLFAEHIFERARTLLPIVLLSVCG
HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAYGFYLSPVLDRIGAYPYAVRLLLCFLLVSPPAFLMGMPMATAMTWLARLGKEHLFV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEE
WAWGINGCFSVIGSAAVPIVATSFGLSAVLQWAAIAYLIAIPAFFAVLLPSRAPSIRLVA
EEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
A
C
>Mature Secondary Structure 
TAVVSTSRPSITSLEAPRLAHYLAVGLIAGAIIALQIAIMRVFAVGSWSHFGSLVVSLA
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MLGFSLSSVVIFAGKGWFDRHWQGAATAALLLIGPLAVGSNLVAQTVPFNAIFLVSDPAQ
HHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCHHH
KWRLLANFLLYLLPFLAGAFFLGIVFLKSRTAFGRVYFADLTGSGLAGLAVLVSLYLFAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCCHHHHHHHHHHHHHCC
ETIIVVPLLLWAAGSILWFLAFGAWKSVVAGVVVAALSISGYLMLPGLLGIPDIAVSQYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHC
GVAYARNFPDGKRIYRSVSPFGDLQVYASSYMHFAPGLSDNAAFGMPEVPANTYVGMYRD
CCCEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEC
GDGPEGIMRNLAPAEQLYFRYLPMHYPYVIKDKPKTFVVQFGGGISTQAALNAGSTSVTV
CCCHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCHHHCCCCCCEEEE
AESNPMTLRAFRDPVLKDVTGDILAEPRLKVIDYDGRLFLANTRERYDVIDLSLADSVGL
ECCCCCEEHHHHCHHHHHCCHHHHCCCCEEEEECCCEEEEECCCCCCEEEEEEECCCCCC
SNPGGFAISEKYAYTREAMLSYMHALADGGVLSITLWNKEEPPKSVLKLYSTVAEAARTF
CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DSQGAANDIFAVSSYLSTTTVLFKRGGFTEAEIKTLRDYTKSMSWEEVYYPGMTYDGSGA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCH
QKVLDDYRASIFGSGQDATLTQPASGATAPADPTAPANPDCDPTAPADPTLDACAGAGGD
HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
TGPQVLPATELQRMTWHALLTGGWEKLAGDYVFDARALSNDQPYFAAYVKVADLPRTLDR
CCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHCCCCCCCEEEEEEHHHHHHHHHH
LDLFQDDWGYLLIWATLGIACIAAASLVLLPVIFGWRIVFSRSRGKLGTILYFACLGLGY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
IMVEVGLISRFTVALANPTVSASVLISSMLVFSGLGSLFAEHIFERARTLLPIVLLSVCG
HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLAYGFYLSPVLDRIGAYPYAVRLLLCFLLVSPPAFLMGMPMATAMTWLARLGKEHLFV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEE
WAWGINGCFSVIGSAAVPIVATSFGLSAVLQWAAIAYLIAIPAFFAVLLPSRAPSIRLVA
EEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA