| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472358
Identifier: 13472358
GI number: 13472358
Start: 2122575
End: 2123603
Strand: Reverse
Name: 13472358
Synonym: mll2626
Alternate gene names: NA
Gene position: 2123603-2122575 (Counterclockwise)
Preceding gene: 13472359
Following gene: 13472357
Centisome position: 30.18
GC content: 65.21
Gene sequence:
>1029_bases ATGGGCGGCGATTGCCTATCTCATCGCCATTCCGGCCTTCTTCGCCGTGCTGTTGCCATCCAGGGCGCCGTCCATCCGGC TGGTAGCGGCCTGATGCCGGACCGGCGCGCCATCGTCGCCGGATTGCTGGCCACGGCGATGTTTCCGGTGGCCAGCCAGG GGGCGCGCTTGCGCAAGGCCATCTCGACCATCGTGCCGTTCAAGTCGTCGCCCTTCCCTTATCGAGGCAAGCTGCCTGAC GGCTCCGCGTCGTTTCTCGACGTCACGGCGGCGGATGGAAGGCACGGCCACACCTCGCCGCGCGGCGGCATTTATTGGGA AGACGAGACCTATTCCGACCGATCGACGCTGCTGGCGGTGCCGAAAGGCTTCGATCCGACCAAGCCGGCTCTCATCGTGG TGTTCTTCCACGGCAATGGCGCCACCTTGCAGCGCGACGTGGTCGGCCGCCAGCGGGTCGTCGCGCAGGTCGAGGCGTCG GGCCTCAACGCCGTGCTGGTGGCGCCGCAATTCGCCAGCAATGCGCAGGATTCCAGCGCCGGCAATTTCTGGACGCAGGG CTATTTTGCCAAATTCATGGCCGAGGCGGCACAGGGACTGGCTAAGCTGACCGGCGCCAAGGCGGCAAAGTTCGACGCCA TGCCGGTGGTGCTGGTCGCCTATAGCGGCGGCTACAATCCGGCCGCTTCCATTCTCAGGAACGGTGACATCGGTGGACGC CTGCTCGGCGTCATCCTGCTCGACGCCGTCTTCGACGAAGCCGATATTTTCGCCAGCTGGATCGCGCAGCACCGGAAAAG TTTCTTCGTCAGCGCCTATGGCAAATCCTCCGCCTCCGGCAATGCCGAGATCCGGCAGTTGCTGGCGGGCCAGGGCATCG ACGCCAGTTCCGATCCGCCCCGCCGCCTCGAAGCCGGCACCATCGCCTTGCTTGCATCCGATGCCGCCCACGATACGTTC GTCACCCGCGCCTTCGTCGGCAATCCGTTGCAATGGTTGCTCGCCCGGTTGCACGGGTTTCAGCGTTAG
Upstream 100 bases:
>100_bases TGTTCGTCTGGGCCTGGGGCATCAATGGCTGTTTCTCGGTCATCGGCTCGGCCGCCGTGCCGATCGTCGCCACCAGCTTC GGCTTAAGCGCCGTGTTGCA
Downstream 100 bases:
>100_bases GGCCTTTTGGCACTCCGGTTCTTACACATGCTTCTGACCGCCATTGTCATCACCCAGATATTGGACCCGCTGCGGATCCT GCTGGTCGGGATCGCCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MGGDCLSHRHSGLLRRAVAIQGAVHPAGSGLMPDRRAIVAGLLATAMFPVASQGARLRKAISTIVPFKSSPFPYRGKLPD GSASFLDVTAADGRHGHTSPRGGIYWEDETYSDRSTLLAVPKGFDPTKPALIVVFFHGNGATLQRDVVGRQRVVAQVEAS GLNAVLVAPQFASNAQDSSAGNFWTQGYFAKFMAEAAQGLAKLTGAKAAKFDAMPVVLVAYSGGYNPAASILRNGDIGGR LLGVILLDAVFDEADIFASWIAQHRKSFFVSAYGKSSASGNAEIRQLLAGQGIDASSDPPRRLEAGTIALLASDAAHDTF VTRAFVGNPLQWLLARLHGFQR
Sequences:
>Translated_342_residues MGGDCLSHRHSGLLRRAVAIQGAVHPAGSGLMPDRRAIVAGLLATAMFPVASQGARLRKAISTIVPFKSSPFPYRGKLPD GSASFLDVTAADGRHGHTSPRGGIYWEDETYSDRSTLLAVPKGFDPTKPALIVVFFHGNGATLQRDVVGRQRVVAQVEAS GLNAVLVAPQFASNAQDSSAGNFWTQGYFAKFMAEAAQGLAKLTGAKAAKFDAMPVVLVAYSGGYNPAASILRNGDIGGR LLGVILLDAVFDEADIFASWIAQHRKSFFVSAYGKSSASGNAEIRQLLAGQGIDASSDPPRRLEAGTIALLASDAAHDTF VTRAFVGNPLQWLLARLHGFQR >Mature_341_residues GGDCLSHRHSGLLRRAVAIQGAVHPAGSGLMPDRRAIVAGLLATAMFPVASQGARLRKAISTIVPFKSSPFPYRGKLPDG SASFLDVTAADGRHGHTSPRGGIYWEDETYSDRSTLLAVPKGFDPTKPALIVVFFHGNGATLQRDVVGRQRVVAQVEASG LNAVLVAPQFASNAQDSSAGNFWTQGYFAKFMAEAAQGLAKLTGAKAAKFDAMPVVLVAYSGGYNPAASILRNGDIGGRL LGVILLDAVFDEADIFASWIAQHRKSFFVSAYGKSSASGNAEIRQLLAGQGIDASSDPPRRLEAGTIALLASDAAHDTFV TRAFVGNPLQWLLARLHGFQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36145; Mature: 36014
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGDCLSHRHSGLLRRAVAIQGAVHPAGSGLMPDRRAIVAGLLATAMFPVASQGARLRKA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH ISTIVPFKSSPFPYRGKLPDGSASFLDVTAADGRHGHTSPRGGIYWEDETYSDRSTLLAV HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEE PKGFDPTKPALIVVFFHGNGATLQRDVVGRQRVVAQVEASGLNAVLVAPQFASNAQDSSA CCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCC GNFWTQGYFAKFMAEAAQGLAKLTGAKAAKFDAMPVVLVAYSGGYNPAASILRNGDIGGR CCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHH LLGVILLDAVFDEADIFASWIAQHRKSFFVSAYGKSSASGNAEIRQLLAGQGIDASSDPP HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCC RRLEAGTIALLASDAAHDTFVTRAFVGNPLQWLLARLHGFQR CHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure GGDCLSHRHSGLLRRAVAIQGAVHPAGSGLMPDRRAIVAGLLATAMFPVASQGARLRKA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH ISTIVPFKSSPFPYRGKLPDGSASFLDVTAADGRHGHTSPRGGIYWEDETYSDRSTLLAV HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEE PKGFDPTKPALIVVFFHGNGATLQRDVVGRQRVVAQVEASGLNAVLVAPQFASNAQDSSA CCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCC GNFWTQGYFAKFMAEAAQGLAKLTGAKAAKFDAMPVVLVAYSGGYNPAASILRNGDIGGR CCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCHH LLGVILLDAVFDEADIFASWIAQHRKSFFVSAYGKSSASGNAEIRQLLAGQGIDASSDPP HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCC RRLEAGTIALLASDAAHDTFVTRAFVGNPLQWLLARLHGFQR CHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA