| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yesQ [H]
Identifier: 13471669
GI number: 13471669
Start: 1430956
End: 1431786
Strand: Reverse
Name: yesQ [H]
Synonym: mll1714
Alternate gene names: 13471669
Gene position: 1431786-1430956 (Counterclockwise)
Preceding gene: 13471670
Following gene: 13471668
Centisome position: 20.35
GC content: 63.66
Gene sequence:
>831_bases ATGATGGGCATTCCGGCCGGCCGCATCATCCGTTTCGCGCTGCTTTCGCTCGGCGCGCTGATGGTCCTTGCGCCCTACAT CTTCATGATCTCGACGGCGGGCAAGACGCAGAGCGACATCTTCACCTCGTCGCTGGCGCTCATCCCGCAGCATTTCTACT TCGCCGAGAATTTCGCCAAGGCGTTTGCCAAGGTGCCGATGGCGGCACTGCTGTGGAACGGCGTTCTCGTCTGCGGCCTG ATCTTCTTCTTCCAGGTCGTGGTGGCGATCCCTTGCGCCTATGCGATGGCCAAGCTGAAGTTCCGCGCCGCGCGGTTGAT GATGGTGCTGGTCATGCTCGGCCTGCTGGTGCCGATCCATGCGACGGCGCTGCCGCTCTACGTCGCCTTCGACAGAATGT CGCTCTTGAACAGCTACACCTCGCTGGTCGCGCCCTTCACCATATCGGTGTTCGCGATCTTCATGTTCCTGCAGTTCTTC CGCGCCATGCCCGACGACCTGCTGCACGCGGCGCGGCTCGACGGCATGTCCGAACTCGGCATCGTCGCGCGCGTCATCGT CCCCAATGCCTGGCCGGCGGTCACCGCCTTTGCGATCTTTTCCGTCGTCGCGCACTGGAACGATCTCTACTGGCCGCTGA TCGTCGTCAGCAAGCAGGCCTACGCCACGCCGCCGCTCGGCCTGATGTATTTCCGCGCCGCCGAGGCCGGCGACGACTAC GGCGCGCTGATGGCCGCCACGCTGATCATCACCCTTCCTCTCGTCGCCGCCTTCCTGCTCGCGCAGAAGCGCTTCGTCGA GGGCATCACCATGACCGGTCTCAAAGGCTGA
Upstream 100 bases:
>100_bases GCGTCGGCTACGCCTCGGCGATGACGGTCGTCTTCCTGGCGATCCTGGTCGTGCTGATGCTTGTGCAATACCGCGTGATC GACCGGCGGGTGCACTACAC
Downstream 100 bases:
>100_bases CCGGGCCAACAAGGAGTACGACCAATGAAGCATATTTCCAGGATTTTGGCCGCGGCGGCGGTGTCGCTGGCGGCAGCCCT TCCGGCTTATGCCGAGACGA
Product: permease protein of sugar ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MMGIPAGRIIRFALLSLGALMVLAPYIFMISTAGKTQSDIFTSSLALIPQHFYFAENFAKAFAKVPMAALLWNGVLVCGL IFFFQVVVAIPCAYAMAKLKFRAARLMMVLVMLGLLVPIHATALPLYVAFDRMSLLNSYTSLVAPFTISVFAIFMFLQFF RAMPDDLLHAARLDGMSELGIVARVIVPNAWPAVTAFAIFSVVAHWNDLYWPLIVVSKQAYATPPLGLMYFRAAEAGDDY GALMAATLIITLPLVAAFLLAQKRFVEGITMTGLKG
Sequences:
>Translated_276_residues MMGIPAGRIIRFALLSLGALMVLAPYIFMISTAGKTQSDIFTSSLALIPQHFYFAENFAKAFAKVPMAALLWNGVLVCGL IFFFQVVVAIPCAYAMAKLKFRAARLMMVLVMLGLLVPIHATALPLYVAFDRMSLLNSYTSLVAPFTISVFAIFMFLQFF RAMPDDLLHAARLDGMSELGIVARVIVPNAWPAVTAFAIFSVVAHWNDLYWPLIVVSKQAYATPPLGLMYFRAAEAGDDY GALMAATLIITLPLVAAFLLAQKRFVEGITMTGLKG >Mature_276_residues MMGIPAGRIIRFALLSLGALMVLAPYIFMISTAGKTQSDIFTSSLALIPQHFYFAENFAKAFAKVPMAALLWNGVLVCGL IFFFQVVVAIPCAYAMAKLKFRAARLMMVLVMLGLLVPIHATALPLYVAFDRMSLLNSYTSLVAPFTISVFAIFMFLQFF RAMPDDLLHAARLDGMSELGIVARVIVPNAWPAVTAFAIFSVVAHWNDLYWPLIVVSKQAYATPPLGLMYFRAAEAGDDY GALMAATLIITLPLVAAFLLAQKRFVEGITMTGLKG
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=272, Percent_Identity=24.6323529411765, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=27.0462633451957, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30192; Mature: 30192
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGIPAGRIIRFALLSLGALMVLAPYIFMISTAGKTQSDIFTSSLALIPQHFYFAENFAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AFAKVPMAALLWNGVLVCGLIFFFQVVVAIPCAYAMAKLKFRAARLMMVLVMLGLLVPIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALPLYVAFDRMSLLNSYTSLVAPFTISVFAIFMFLQFFRAMPDDLLHAARLDGMSELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH IVARVIVPNAWPAVTAFAIFSVVAHWNDLYWPLIVVSKQAYATPPLGLMYFRAAEAGDDY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCHHHHHHHHHCCCCCH GALMAATLIITLPLVAAFLLAQKRFVEGITMTGLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure MMGIPAGRIIRFALLSLGALMVLAPYIFMISTAGKTQSDIFTSSLALIPQHFYFAENFAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AFAKVPMAALLWNGVLVCGLIFFFQVVVAIPCAYAMAKLKFRAARLMMVLVMLGLLVPIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALPLYVAFDRMSLLNSYTSLVAPFTISVFAIFMFLQFFRAMPDDLLHAARLDGMSELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH IVARVIVPNAWPAVTAFAIFSVVAHWNDLYWPLIVVSKQAYATPPLGLMYFRAAEAGDDY HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECHHCCCCCHHHHHHHHHCCCCCH GALMAATLIITLPLVAAFLLAQKRFVEGITMTGLKG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]