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The map label for this gene is ugpB [H]

Identifier: 13471668

GI number: 13471668

Start: 1429666

End: 1430931

Strand: Reverse

Name: ugpB [H]

Synonym: mll1712

Alternate gene names: 13471668

Gene position: 1430931-1429666 (Counterclockwise)

Preceding gene: 13471669

Following gene: 13471667

Centisome position: 20.34

GC content: 63.19

Gene sequence:

>1266_bases
ATGAAGCATATTTCCAGGATTTTGGCCGCGGCGGCGGTGTCGCTGGCGGCAGCCCTTCCGGCTTATGCCGAGACGACGCT
GACGGTTCACTACCCGATGCCCGGCTTCTTCAAGAACGTGATGGACACGATCTCGAAGAAGTTCATGGAGGAGAATCCCG
ACATCAAGATCCAGTTCGCCAGCCCGTCGGCGACCTATGAAGAAGGCGTCCAGACCATTCTTCGCCAGGCCGGCACCGAC
GAGATGCCCGACATCACCTTCATCGGCCTCAACCGCCTGCGCATGCTCAACGAGCGCGACGTCGCCGTCGATCTCGGCCC
GCTGGTCAAGAAGGAAGGCAACATGGCGGAGCTCGGCTTCTCCGACACGATCCTGAAGCTGGCGCAGGTCAACGGCAAGC
AGGTGGGCCTCGCCTTCGCCACCTCCAACCCGATCATGTATTACAATGCCGATCTGGTGAAGGCGGCCGGCGGCGATCCG
GACAATCCGCCCAAGACCTGGGATGAGGTCATCGCGCTCGGCGGCAAGATCAAGGCGCTCGGCAATGGCGTCGACGGCAT
CGACTTCCGCTGGCAGGGCGATGACTGGATGTTCTCGGCGCTGCTGTTCGGCGCCGGCGGCAAGATGCTGAACGAGGACG
AAAGCAAGGTCGCCTTCAACGGGCCGGAAGGCGAGAAGGCGGTGGAGATCCTCGAGCGGATGGTGAAGGAGGGCGGCATG
CCGGTCTTCACCAAGCCGGCGGGCGAGCAGGCCTTCGCGGCCGGCAAGGTCGGCTTCGAATTCCAGACCACCGGTGCGCT
GGTCAACACGATCAAGAATGTCGGCGACAAGTTCACGCTGCGCACCGCCAAGATCCCGCTGATCGATCCCGTGAACGGCC
ATCTGCCGACCGGCGGCAATGCCGTGGTCATCCTGACCAAGGACGCGGCCAAGCAGGAGGCAGCCTGGAAGTTCGCGAAA
TTCGCCGCCGGCCCCTATGGCGCGTCCGTCGTCGTGCCCGGCACAGGCTATGTCCCCAACAACGAGCTGGCGGCGAAATC
ATCAGACTATCTCGGCGATTTCTACAAGAAGAACCCGCTGTTCCAGGCCGGGCTTAGCCAGATGCCGCGGATGGTTCCGT
GGTATGCTTTCCCGGGCACCAACGGGGTCAAGGTGACGCAGACGATCGTCGACAATCTGTCGCGCATCGTCGACCAGTCG
GCCTCGCCCAAGGACGCGCTCAATGACGCGGCCGGCGACGTCGAAGGCATGCTGCCGACGCAGTAG

Upstream 100 bases:

>100_bases
TCCTCTCGTCGCCGCCTTCCTGCTCGCGCAGAAGCGCTTCGTCGAGGGCATCACCATGACCGGTCTCAAAGGCTGACCGG
GCCAACAAGGAGTACGACCA

Downstream 100 bases:

>100_bases
GGGGTTATGGCGACGCTCTTCCTTCCCCCCTTGCGGGGGAAGGTGGATCGGCGCGCAGCGCCGAGACGGATGAGCGACTA
TCTGAGGTGTCAAGTTGCAT

Product: sugar binding protein of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKHISRILAAAAVSLAAALPAYAETTLTVHYPMPGFFKNVMDTISKKFMEENPDIKIQFASPSATYEEGVQTILRQAGTD
EMPDITFIGLNRLRMLNERDVAVDLGPLVKKEGNMAELGFSDTILKLAQVNGKQVGLAFATSNPIMYYNADLVKAAGGDP
DNPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGKMLNEDESKVAFNGPEGEKAVEILERMVKEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALVNTIKNVGDKFTLRTAKIPLIDPVNGHLPTGGNAVVILTKDAAKQEAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSSDYLGDFYKKNPLFQAGLSQMPRMVPWYAFPGTNGVKVTQTIVDNLSRIVDQS
ASPKDALNDAAGDVEGMLPTQ

Sequences:

>Translated_421_residues
MKHISRILAAAAVSLAAALPAYAETTLTVHYPMPGFFKNVMDTISKKFMEENPDIKIQFASPSATYEEGVQTILRQAGTD
EMPDITFIGLNRLRMLNERDVAVDLGPLVKKEGNMAELGFSDTILKLAQVNGKQVGLAFATSNPIMYYNADLVKAAGGDP
DNPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGKMLNEDESKVAFNGPEGEKAVEILERMVKEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALVNTIKNVGDKFTLRTAKIPLIDPVNGHLPTGGNAVVILTKDAAKQEAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSSDYLGDFYKKNPLFQAGLSQMPRMVPWYAFPGTNGVKVTQTIVDNLSRIVDQS
ASPKDALNDAAGDVEGMLPTQ
>Mature_421_residues
MKHISRILAAAAVSLAAALPAYAETTLTVHYPMPGFFKNVMDTISKKFMEENPDIKIQFASPSATYEEGVQTILRQAGTD
EMPDITFIGLNRLRMLNERDVAVDLGPLVKKEGNMAELGFSDTILKLAQVNGKQVGLAFATSNPIMYYNADLVKAAGGDP
DNPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGKMLNEDESKVAFNGPEGEKAVEILERMVKEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALVNTIKNVGDKFTLRTAKIPLIDPVNGHLPTGGNAVVILTKDAAKQEAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSSDYLGDFYKKNPLFQAGLSQMPRMVPWYAFPGTNGVKVTQTIVDNLSRIVDQS
ASPKDALNDAAGDVEGMLPTQ

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=411, Percent_Identity=27.2506082725061, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45117; Mature: 45117

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHISRILAAAAVSLAAALPAYAETTLTVHYPMPGFFKNVMDTISKKFMEENPDIKIQFA
CHHHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
SPSATYEEGVQTILRQAGTDEMPDITFIGLNRLRMLNERDVAVDLGPLVKKEGNMAELGF
CCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCEEECCHHHCCCCCEEECCC
SDTILKLAQVNGKQVGLAFATSNPIMYYNADLVKAAGGDPDNPPKTWDEVIALGGKIKAL
HHHHHHHHHCCCCEEEEEEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHCCCEEEEC
GNGVDGIDFRWQGDDWMFSALLFGAGGKMLNEDESKVAFNGPEGEKAVEILERMVKEGGM
CCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
PVFTKPAGEQAFAAGKVGFEFQTTGALVNTIKNVGDKFTLRTAKIPLIDPVNGHLPTGGN
EEEECCCCCCHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCC
AVVILTKDAAKQEAAWKFAKFAAGPYGASVVVPGTGYVPNNELAAKSSDYLGDFYKKNPL
EEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCH
FQAGLSQMPRMVPWYAFPGTNGVKVTQTIVDNLSRIVDQSASPKDALNDAAGDVEGMLPT
HHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
Q
C
>Mature Secondary Structure
MKHISRILAAAAVSLAAALPAYAETTLTVHYPMPGFFKNVMDTISKKFMEENPDIKIQFA
CHHHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
SPSATYEEGVQTILRQAGTDEMPDITFIGLNRLRMLNERDVAVDLGPLVKKEGNMAELGF
CCCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCEEECCHHHCCCCCEEECCC
SDTILKLAQVNGKQVGLAFATSNPIMYYNADLVKAAGGDPDNPPKTWDEVIALGGKIKAL
HHHHHHHHHCCCCEEEEEEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHCCCEEEEC
GNGVDGIDFRWQGDDWMFSALLFGAGGKMLNEDESKVAFNGPEGEKAVEILERMVKEGGM
CCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
PVFTKPAGEQAFAAGKVGFEFQTTGALVNTIKNVGDKFTLRTAKIPLIDPVNGHLPTGGN
EEEECCCCCCHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCC
AVVILTKDAAKQEAAWKFAKFAAGPYGASVVVPGTGYVPNNELAAKSSDYLGDFYKKNPL
EEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCH
FQAGLSQMPRMVPWYAFPGTNGVKVTQTIVDNLSRIVDQSASPKDALNDAAGDVEGMLPT
HHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]