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The map label for this gene is ugpA [H]

Identifier: 13471670

GI number: 13471670

Start: 1431783

End: 1432706

Strand: Reverse

Name: ugpA [H]

Synonym: mll1715

Alternate gene names: 13471670

Gene position: 1432706-1431783 (Counterclockwise)

Preceding gene: 13471671

Following gene: 13471669

Centisome position: 20.36

GC content: 63.85

Gene sequence:

>924_bases
ATGTCTAGCGTCGCGCTGGCGGGCAATGTCGCGAGCGCCGCGGCACGGCGTGCGCGCAGCGAAGACCGGACCGCCTGGCT
GCTGGCGGCGCCGGCCATCGTGCTGTTGCTGCTGTTCGTGCTGTTGCCGGTGGCCGCCGTCATCTTTCTCGGCTTCACCG
ATTTCGAGCTCGGCTACGGCAAGTTCCGCTTCGTCGGCTTCGAGAACTACGCGCATCTTCTAAACGACCGCACCTTCCGC
CGGTCGCTGTGGAACACCTCGGTCTATACGGCGATCGTTGCGCCGGTCTCGATCGTGCTTGGCCTGGGGGTTGCGCTGCT
GATCGAAGGCGAGGGGCGGGCGCGCGGCTTTTTCCGCACCGTCTATTTCCTGCCCGTCGCCTCGCTGATCGTCGCCATGG
CGACGGTCTGGCAATACATCTTCCATCCGACGATCGGGCCGCTCAACGCTTTGCTTTCGCTTGCCGGCATTCCCGGCCCG
AACTGGCTCGGCGCGTCGAACACCGTGCTCTACAGCCTGTCGATCATCGGCATCTGGCAGTCGGTCGGCTTCAACATGGT
GCTGTTCCTGGCGGGGCTGACGGCGATCCCGCGCGAGCTCTATGCCGCCGCCCATGTCGACGGCGCCAAATCGGCGCTCG
ACCGGTTTTTCCTGGTCACCTGGCCGATGCTCGGGCCGACGACGCTGTTCGTCGTCACCATCAGCATCACCAATGCAGTG
AAGGTTTTCGAGACGGTGAAGATGCTGACCGATGGCGGCCCCAACAAGGCCTCCGAAGTGCTGCTTTTCACCATCTACCA
GGAGGGGTTCGTCTATCTGCGCGTCGGCTACGCCTCGGCGATGACGGTCGTCTTCCTGGCGATCCTGGTCGTGCTGATGC
TTGTGCAATACCGCGTGATCGACCGGCGGGTGCACTACACATGA

Upstream 100 bases:

>100_bases
ATGAAGGTGGGTGTCGTCCTGGCCCCCGAACAGGCGATGGTCTTCGGGCCGGAGGGAAAGCGGCTGCGCATCGCGGCGGG
CGCCCGGCAGGAGCCGGCCT

Downstream 100 bases:

>100_bases
TGGGCATTCCGGCCGGCCGCATCATCCGTTTCGCGCTGCTTTCGCTCGGCGCGCTGATGGTCCTTGCGCCCTACATCTTC
ATGATCTCGACGGCGGGCAA

Product: permease protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSSVALAGNVASAAARRARSEDRTAWLLAAPAIVLLLLFVLLPVAAVIFLGFTDFELGYGKFRFVGFENYAHLLNDRTFR
RSLWNTSVYTAIVAPVSIVLGLGVALLIEGEGRARGFFRTVYFLPVASLIVAMATVWQYIFHPTIGPLNALLSLAGIPGP
NWLGASNTVLYSLSIIGIWQSVGFNMVLFLAGLTAIPRELYAAAHVDGAKSALDRFFLVTWPMLGPTTLFVVTISITNAV
KVFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVFLAILVVLMLVQYRVIDRRVHYT

Sequences:

>Translated_307_residues
MSSVALAGNVASAAARRARSEDRTAWLLAAPAIVLLLLFVLLPVAAVIFLGFTDFELGYGKFRFVGFENYAHLLNDRTFR
RSLWNTSVYTAIVAPVSIVLGLGVALLIEGEGRARGFFRTVYFLPVASLIVAMATVWQYIFHPTIGPLNALLSLAGIPGP
NWLGASNTVLYSLSIIGIWQSVGFNMVLFLAGLTAIPRELYAAAHVDGAKSALDRFFLVTWPMLGPTTLFVVTISITNAV
KVFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVFLAILVVLMLVQYRVIDRRVHYT
>Mature_306_residues
SSVALAGNVASAAARRARSEDRTAWLLAAPAIVLLLLFVLLPVAAVIFLGFTDFELGYGKFRFVGFENYAHLLNDRTFRR
SLWNTSVYTAIVAPVSIVLGLGVALLIEGEGRARGFFRTVYFLPVASLIVAMATVWQYIFHPTIGPLNALLSLAGIPGPN
WLGASNTVLYSLSIIGIWQSVGFNMVLFLAGLTAIPRELYAAAHVDGAKSALDRFFLVTWPMLGPTTLFVVTISITNAVK
VFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVFLAILVVLMLVQYRVIDRRVHYT

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=28.3783783783784, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787570, Length=241, Percent_Identity=33.195020746888, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790465, Length=232, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33579; Mature: 33448

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVALAGNVASAAARRARSEDRTAWLLAAPAIVLLLLFVLLPVAAVIFLGFTDFELGYG
CCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KFRFVGFENYAHLLNDRTFRRSLWNTSVYTAIVAPVSIVLGLGVALLIEGEGRARGFFRT
EEEEEEHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH
VYFLPVASLIVAMATVWQYIFHPTIGPLNALLSLAGIPGPNWLGASNTVLYSLSIIGIWQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHH
SVGFNMVLFLAGLTAIPRELYAAAHVDGAKSALDRFFLVTWPMLGPTTLFVVTISITNAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHH
KVFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVFLAILVVLMLVQYRVI
HHHHHHHHHHCCCCCCHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
DRRVHYT
HHHHCCC
>Mature Secondary Structure 
SSVALAGNVASAAARRARSEDRTAWLLAAPAIVLLLLFVLLPVAAVIFLGFTDFELGYG
CCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KFRFVGFENYAHLLNDRTFRRSLWNTSVYTAIVAPVSIVLGLGVALLIEGEGRARGFFRT
EEEEEEHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH
VYFLPVASLIVAMATVWQYIFHPTIGPLNALLSLAGIPGPNWLGASNTVLYSLSIIGIWQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHH
SVGFNMVLFLAGLTAIPRELYAAAHVDGAKSALDRFFLVTWPMLGPTTLFVVTISITNAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHH
KVFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVFLAILVVLMLVQYRVI
HHHHHHHHHHCCCCCCHHHEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
DRRVHYT
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]