Click here to switch to the map view.

The map label for this gene is 13471597

Identifier: 13471597

GI number: 13471597

Start: 1345339

End: 1345782

Strand: Reverse

Name: 13471597

Synonym: mll1617

Alternate gene names: NA

Gene position: 1345782-1345339 (Counterclockwise)

Preceding gene: 13471598

Following gene: 13471593

Centisome position: 19.13

GC content: 62.84

Gene sequence:

>444_bases
ATGCGCACATATTCTTTCCTGCCGGTGCTTTCGGCCCTGGCCGTATCGACCGCCTTTCTGCTCGCTTCGCCAGCAATGGC
CGAGGTGGTGAAGTACAAGGCAACGCTCGATGGCGGCCAGCAGAACCCGCCCGTCACCACCAAGGGCAAAGGCACCGCCA
CGCTCACCTTCGACACCACCAAGAAAAAGCTCAGCTGGGACGTCAAATATTCCGGCCTCAGCGGACCGGCGACGGCAGCG
CATATTCACGGCCCGGCGGCGATGGGTGCGAATGCCGCTCCCGTCATCCCGTTCAAAGGCAAGCTCAAGAGCCCGATCAA
GGGCTCGGCAACGCTGACGGACGCGCAGGCCGCCGACCTGGCCGCCGGCAACTATTATGTCAATGTTCACACCGCCGCCA
ACAAGGATGGCGAGATCCGCGGCCAGATCGAGGCGGCGAAATAG

Upstream 100 bases:

>100_bases
TCCGTGTTCAGGGAAACATTGCGTCTCCCAGCCGTTGCAGTTGAGGCATGCGCGCGCCGGGGGAGCAGCGACGTGTGCGA
CATTCAATCGGAGGTTCTTC

Downstream 100 bases:

>100_bases
CGGAACCGCTTGGACAAAAGGGGCGGGCTGCCGCCCCTTTTGTTTGGATCACGCCTTGTCGCGGATCTGGGTCATCGTGC
GGGTCGGCGTGATCGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: CHRD Domain Containing Protein; Signal Peptide; CHRD Domain-Containing Superfamily; Chordin

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRTYSFLPVLSALAVSTAFLLASPAMAEVVKYKATLDGGQQNPPVTTKGKGTATLTFDTTKKKLSWDVKYSGLSGPATAA
HIHGPAAMGANAAPVIPFKGKLKSPIKGSATLTDAQAADLAAGNYYVNVHTAANKDGEIRGQIEAAK

Sequences:

>Translated_147_residues
MRTYSFLPVLSALAVSTAFLLASPAMAEVVKYKATLDGGQQNPPVTTKGKGTATLTFDTTKKKLSWDVKYSGLSGPATAA
HIHGPAAMGANAAPVIPFKGKLKSPIKGSATLTDAQAADLAAGNYYVNVHTAANKDGEIRGQIEAAK
>Mature_147_residues
MRTYSFLPVLSALAVSTAFLLASPAMAEVVKYKATLDGGQQNPPVTTKGKGTATLTFDTTKKKLSWDVKYSGLSGPATAA
HIHGPAAMGANAAPVIPFKGKLKSPIKGSATLTDAQAADLAAGNYYVNVHTAANKDGEIRGQIEAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15160; Mature: 15160

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50933 CHRD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYSFLPVLSALAVSTAFLLASPAMAEVVKYKATLDGGQQNPPVTTKGKGTATLTFDTT
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCC
KKKLSWDVKYSGLSGPATAAHIHGPAAMGANAAPVIPFKGKLKSPIKGSATLTDAQAADL
CCEEEEEEEECCCCCCCEEEEECCCHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCE
AAGNYYVNVHTAANKDGEIRGQIEAAK
ECCCEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MRTYSFLPVLSALAVSTAFLLASPAMAEVVKYKATLDGGQQNPPVTTKGKGTATLTFDTT
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCC
KKKLSWDVKYSGLSGPATAAHIHGPAAMGANAAPVIPFKGKLKSPIKGSATLTDAQAADL
CCEEEEEEEECCCCCCCEEEEECCCHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCE
AAGNYYVNVHTAANKDGEIRGQIEAAK
ECCCEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA