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The map label for this gene is omp31 [H]

Identifier: 13471424

GI number: 13471424

Start: 1165123

End: 1165800

Strand: Reverse

Name: omp31 [H]

Synonym: mll1390

Alternate gene names: 13471424

Gene position: 1165800-1165123 (Counterclockwise)

Preceding gene: 13471425

Following gene: 13471416

Centisome position: 16.57

GC content: 57.23

Gene sequence:

>678_bases
ATGCGGGCTTCCATTTTTATCGGTTCTGTATTCTTCGCGGCTCTGATGGCTGGCACAGCACTTGCCGCTGACGCGACGGT
CGAGTTGCCGGTTGCATCGAGTTACAACTGGACGGGCGGCTACATTGGCGCGCAGATCGGCGGCGGGTGGAGCAAGGTCG
ATCAGCCATGGGGTTTTACTGAGGCCAGCCCGAACATCTTTGACCAGGACAATGCGGATGGAAGCGGTGTCGTCGGCGGC
TTGCATGCCGGCTACAACTGGCAATCCGGCTCCTTCGTGTTCGGTGGCGAGGCGGACATCAACGCAACCGGCATAGATGG
CGACGACGGTGGAAGCGGAGGCGACATCAATGGCTTCAAGGCGAGATGGGTTGCTTCCGTCCGCGCCAGGGCTGGTTTCG
CATTTGATCGAGTGCTGATCTACGGTACGGGCGGTTACGCCTACCTCAATGGAAAAGCAGACACTCGAGATGTCGGCCGA
CAGGAAAGTCACTCGGCTTCATTCAACGGATGGACCATAGGTGCAGGCGCTGAATACGCCCTCACCGACAACATCACGGT
TCGTGGCGAATATCGCTACGCGGATTTCGGCTCAAAGACTGTCGTCTTCAACAACTATGTCGAAGACATTAGCCCGGCCC
TGCACACTGTCACGATTGGTGTGTCGTATAAGTTTTGA

Upstream 100 bases:

>100_bases
AGCTTGTTTTCTTTAGTTGTTGCGGAAATGTCACGTCTGATGCGAACGGGCTGTAGTATTGTCAGCATCAGGGCAATGCT
TCGTTCGAGGGATCAAAGGC

Downstream 100 bases:

>100_bases
CCGTCTTCGGCGCGGGAGACCGCCCCGCGTCGAGCCGTTACAGCAAAGTCCTTGACCAGCGCGGTTCCCTGTTTCACGCA
AACGGGGAACCGTTTTATCT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRASIFIGSVFFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQDNADGSGVVGG
LHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVASVRARAGFAFDRVLIYGTGGYAYLNGKADTRDVGR
QESHSASFNGWTIGAGAEYALTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF

Sequences:

>Translated_225_residues
MRASIFIGSVFFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQDNADGSGVVGG
LHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVASVRARAGFAFDRVLIYGTGGYAYLNGKADTRDVGR
QESHSASFNGWTIGAGAEYALTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF
>Mature_225_residues
MRASIFIGSVFFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQDNADGSGVVGG
LHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVASVRARAGFAFDRVLIYGTGGYAYLNGKADTRDVGR
QESHSASFNGWTIGAGAEYALTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 23641; Mature: 23641

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASIFIGSVFFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFT
CCCEEEHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCC
EASPNIFDQDNADGSGVVGGLHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFK
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCH
ARWVASVRARAGFAFDRVLIYGTGGYAYLNGKADTRDVGRQESHSASFNGWTIGAGAEYA
HHHHEEHHHHCCCEEEEEEEEECCCEEEECCCCCCHHCCCCCCCCCCCCCEEECCCCEEE
LTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF
EECCEEEEEEEEEECCCCEEEEECCCHHHCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRASIFIGSVFFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFT
CCCEEEHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCC
EASPNIFDQDNADGSGVVGGLHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFK
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCH
ARWVASVRARAGFAFDRVLIYGTGGYAYLNGKADTRDVGRQESHSASFNGWTIGAGAEYA
HHHHEEHHHHCCCEEEEEEEEECCCEEEECCCCCCHHCCCCCCCCCCCCCEEECCCCEEE
LTDNITVRGEYRYADFGSKTVVFNNYVEDISPALHTVTIGVSYKF
EECCEEEEEEEEEECCCCEEEEECCCHHHCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]