Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471425

Identifier: 13471425

GI number: 13471425

Start: 1166120

End: 1166362

Strand: Reverse

Name: 13471425

Synonym: msl1391

Alternate gene names: NA

Gene position: 1166362-1166120 (Counterclockwise)

Preceding gene: 13471426

Following gene: 13471424

Centisome position: 16.58

GC content: 60.08

Gene sequence:

>243_bases
GTGCGCACCCACCAAATTCCTAGAAGACTTGGTGGAAAGACCCTGAAAGCGAGATGCGTTTGGCGCGTCTCGAGCCATGG
ACGTGACCGCGACGACCGTGCCAATGCCGCCGCTTTCCCAGCCATGCGCCAGCAGAAACACCCCAAGGAACGGCTCGATG
CCGGTCTGAGCATCGGCCATGAAGATATTCAGAGTTTAATGGGCCAGATCCTGCATGCCGCCGCCCGGATCGCGGACCTG
TAG

Upstream 100 bases:

>100_bases
GCTATATGCCCGCCAACGCCGGTTTTTGCCGGCCGAGTGGGTGCGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAG
CGGGTCCACAGTTCAATCCT

Downstream 100 bases:

>100_bases
CCATCCTCCGAGTCGCGATCGGAAACGCGCGGCCGGTGTCTGGTTCCGTTCCAGATGCTATGGCTTCGTGGCGTTGCCGC
ATGCCGAGATCGAGCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MRTHQIPRRLGGKTLKARCVWRVSSHGRDRDDRANAAAFPAMRQQKHPKERLDAGLSIGHEDIQSLMGQILHAAARIADL

Sequences:

>Translated_80_residues
MRTHQIPRRLGGKTLKARCVWRVSSHGRDRDDRANAAAFPAMRQQKHPKERLDAGLSIGHEDIQSLMGQILHAAARIADL
>Mature_80_residues
MRTHQIPRRLGGKTLKARCVWRVSSHGRDRDDRANAAAFPAMRQQKHPKERLDAGLSIGHEDIQSLMGQILHAAARIADL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8990; Mature: 8990

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTHQIPRRLGGKTLKARCVWRVSSHGRDRDDRANAAAFPAMRQQKHPKERLDAGLSIGH
CCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCH
EDIQSLMGQILHAAARIADL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTHQIPRRLGGKTLKARCVWRVSSHGRDRDDRANAAAFPAMRQQKHPKERLDAGLSIGH
CCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCH
EDIQSLMGQILHAAARIADL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA