| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470533
Identifier: 13470533
GI number: 13470533
Start: 186429
End: 188093
Strand: Direct
Name: 13470533
Synonym: mlr0266
Alternate gene names: NA
Gene position: 186429-188093 (Clockwise)
Preceding gene: 13470532
Following gene: 13470534
Centisome position: 2.65
GC content: 64.38
Gene sequence:
>1665_bases GTGGTTCCAGGACGCTGTTTCAATGCGAAGGCATGGTGGCCGCAAGCGCTGGCAGATCTCGCGCTGTTGGCTGTCATCGT CCTGTTCGTCCTGCCGGCGCAGGCCCAGGAGCAGTCGCTGGACATCCCGCCGATGCGGTTCGCCGTCGTGCGCAGCAATG CGCCGGGATGCGAGCCCAATTGTCCGGAATGGATATCGGCGGAAGGCACCATCGCGGCGGGCACGCCGGCGCTGCTCAAG CGCACGCTCAAAACGCTCGGGGGACGGCAACTGCCCGTCGTCGTCAACTCGCCCGGCGGCAATGTCGATGCCGCACTCGC GCTTGGCAGGATGATCCGTAAGGCCAAGCTCGATATCGCCGTCGGCGTGACGGTGTTTTCCGGCTGCCAGCCGGAGGCGA AGAATTGCAGCGACAACAAGGGCAAGGGTGCCGACTATTTCGGCGTGGCTTTTGATGACGGGGCCATGTGCAATTCGGCC TGTCCGCTGATGTTTTCCGGCGGTATCCGCCGCGTGGTCGGAGACTTCGCCTATCTCGGCGTCCACCAGATCACCACCAC ATATCGCCGTGAGAAGCTGCTCTATCGGACCACCTACCGGATCGTGAACGGCAAGAAGAAGGTGATCAACACCAAGGTGG TCAGCCGGAAAAATGCCGGCAGCTACAAGACCTACGAGATGAGCAAGGCGGTCGAGAAGACGCTTTCGGCCTATCTCAGG GAAATGGGGATAGGCGACGGCGTGCTGGAAATGATGAAGGCCACGCCGGCCAGCGACATCCGCCAGATCGGGCTCGACGA CATGACGGCGATGAAGCTGGTGACCAGTCGCGACGCCGTGGACCTGTTGACCTCCGCAAGCTTGTGCGCGCCGCAACAGC CGGCCGCGAATTGCCGGGAAATGCCGGGCTCTGCAAACGATGCGACGCCATCGGCCGCTGCGACCGGCAGGCCCAGGAAT GTCGTACCGGCTGGACCGGAAACCGCCAAGGCCGGCGCGGACATGCGCTTTGTCGTGGTTCGCGGCAGCAATCCCCTGTG CAATCCAGACTGTCCGGAATGGATCTCGGCGGAAGGCGCGATCACGAGCCAGACGCCGCAGAAGCTGCGCCAGTTGCTCG CCACGCTTGGCAATCGGCGCCTGCCTGTCGTGATCAGCTCACGGGGAGGTGACCTGGCCGGCGCTCTGGCGGCGGGCCGG ATTATCCGCGAAAGGAAGCTCGACGTCGCCGTGGGCCGGACCGATTTCGTCGATTGCGACCCAGGAGCATGGAATTGCCT GGCCAAGGAAGGCGCTTATGCCGGATTGAGCATCGATGCGGGCGTCGAGTGCGATACGGCCTGCGCGCTGATGCTTGCCG GCGGCGCGAGAAGGCTTGTCGGTCCGCAGGCGCGGCTCAGCCTCTACCCGATGGGACAGAAGCAGATGGTCAAGGCGTAT CTCGAGGAGATGGCGATCGGTCCCGCTCTGTTCAAAGCGATCGCGGGGCGCTCGGCCGAGCGCCAGCTCGGACCGGACAT CATGCTGAAGGCGGGACTGACGACGGGACCGCAATCGGTCGACGCACTGACCGGCGCCACGATTTGCAAGGCTGTTCCCA GGCCCGATAATTGCCGCGGCCTGCCGCCTGCCAATGCGGCAGCCGACGCGCCAGCAAAGCTGTAG
Upstream 100 bases:
>100_bases TTCGTTTCCGTCGCCGCGTGAAATCGGAACTGCGCCCACCCTGTTGCAAGCGCCATCGCCGCAACTAGTATAGGTTGCAT TGAGGGAGCTTGGCGAAAGA
Downstream 100 bases:
>100_bases AGCGCGGCTTCGGAAGCTGGCCATCGAGGCAGGTTGAGCTGCCTTCGATCTTTCCGCTATCGTCGCGGCCGATGGCGCCG GGGCGGAGGATCGACAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MVPGRCFNAKAWWPQALADLALLAVIVLFVLPAQAQEQSLDIPPMRFAVVRSNAPGCEPNCPEWISAEGTIAAGTPALLK RTLKTLGGRQLPVVVNSPGGNVDAALALGRMIRKAKLDIAVGVTVFSGCQPEAKNCSDNKGKGADYFGVAFDDGAMCNSA CPLMFSGGIRRVVGDFAYLGVHQITTTYRREKLLYRTTYRIVNGKKKVINTKVVSRKNAGSYKTYEMSKAVEKTLSAYLR EMGIGDGVLEMMKATPASDIRQIGLDDMTAMKLVTSRDAVDLLTSASLCAPQQPAANCREMPGSANDATPSAAATGRPRN VVPAGPETAKAGADMRFVVVRGSNPLCNPDCPEWISAEGAITSQTPQKLRQLLATLGNRRLPVVISSRGGDLAGALAAGR IIRERKLDVAVGRTDFVDCDPGAWNCLAKEGAYAGLSIDAGVECDTACALMLAGGARRLVGPQARLSLYPMGQKQMVKAY LEEMAIGPALFKAIAGRSAERQLGPDIMLKAGLTTGPQSVDALTGATICKAVPRPDNCRGLPPANAAADAPAKL
Sequences:
>Translated_554_residues MVPGRCFNAKAWWPQALADLALLAVIVLFVLPAQAQEQSLDIPPMRFAVVRSNAPGCEPNCPEWISAEGTIAAGTPALLK RTLKTLGGRQLPVVVNSPGGNVDAALALGRMIRKAKLDIAVGVTVFSGCQPEAKNCSDNKGKGADYFGVAFDDGAMCNSA CPLMFSGGIRRVVGDFAYLGVHQITTTYRREKLLYRTTYRIVNGKKKVINTKVVSRKNAGSYKTYEMSKAVEKTLSAYLR EMGIGDGVLEMMKATPASDIRQIGLDDMTAMKLVTSRDAVDLLTSASLCAPQQPAANCREMPGSANDATPSAAATGRPRN VVPAGPETAKAGADMRFVVVRGSNPLCNPDCPEWISAEGAITSQTPQKLRQLLATLGNRRLPVVISSRGGDLAGALAAGR IIRERKLDVAVGRTDFVDCDPGAWNCLAKEGAYAGLSIDAGVECDTACALMLAGGARRLVGPQARLSLYPMGQKQMVKAY LEEMAIGPALFKAIAGRSAERQLGPDIMLKAGLTTGPQSVDALTGATICKAVPRPDNCRGLPPANAAADAPAKL >Mature_554_residues MVPGRCFNAKAWWPQALADLALLAVIVLFVLPAQAQEQSLDIPPMRFAVVRSNAPGCEPNCPEWISAEGTIAAGTPALLK RTLKTLGGRQLPVVVNSPGGNVDAALALGRMIRKAKLDIAVGVTVFSGCQPEAKNCSDNKGKGADYFGVAFDDGAMCNSA CPLMFSGGIRRVVGDFAYLGVHQITTTYRREKLLYRTTYRIVNGKKKVINTKVVSRKNAGSYKTYEMSKAVEKTLSAYLR EMGIGDGVLEMMKATPASDIRQIGLDDMTAMKLVTSRDAVDLLTSASLCAPQQPAANCREMPGSANDATPSAAATGRPRN VVPAGPETAKAGADMRFVVVRGSNPLCNPDCPEWISAEGAITSQTPQKLRQLLATLGNRRLPVVISSRGGDLAGALAAGR IIRERKLDVAVGRTDFVDCDPGAWNCLAKEGAYAGLSIDAGVECDTACALMLAGGARRLVGPQARLSLYPMGQKQMVKAY LEEMAIGPALFKAIAGRSAERQLGPDIMLKAGLTTGPQSVDALTGATICKAVPRPDNCRGLPPANAAADAPAKL
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58417; Mature: 58417
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPGRCFNAKAWWPQALADLALLAVIVLFVLPAQAQEQSLDIPPMRFAVVRSNAPGCEPN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCC CPEWISAEGTIAAGTPALLKRTLKTLGGRQLPVVVNSPGGNVDAALALGRMIRKAKLDIA CCHHHCCCCCEECCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCEE VGVTVFSGCQPEAKNCSDNKGKGADYFGVAFDDGAMCNSACPLMFSGGIRRVVGDFAYLG EEEHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHH VHQITTTYRREKLLYRTTYRIVNGKKKVINTKVVSRKNAGSYKTYEMSKAVEKTLSAYLR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EMGIGDGVLEMMKATPASDIRQIGLDDMTAMKLVTSRDAVDLLTSASLCAPQQPAANCRE HCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH MPGSANDATPSAAATGRPRNVVPAGPETAKAGADMRFVVVRGSNPLCNPDCPEWISAEGA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCHHHHCCCCC ITSQTPQKLRQLLATLGNRRLPVVISSRGGDLAGALAAGRIIRERKLDVAVGRTDFVDCD CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCC PGAWNCLAKEGAYAGLSIDAGVECDTACALMLAGGARRLVGPQARLSLYPMGQKQMVKAY CCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCEEEECCCHHHHHHHH LEEMAIGPALFKAIAGRSAERQLGPDIMLKAGLTTGPQSVDALTGATICKAVPRPDNCRG HHHHHCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LPPANAAADAPAKL CCCCCCCCCCCCCC >Mature Secondary Structure MVPGRCFNAKAWWPQALADLALLAVIVLFVLPAQAQEQSLDIPPMRFAVVRSNAPGCEPN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCC CPEWISAEGTIAAGTPALLKRTLKTLGGRQLPVVVNSPGGNVDAALALGRMIRKAKLDIA CCHHHCCCCCEECCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCEE VGVTVFSGCQPEAKNCSDNKGKGADYFGVAFDDGAMCNSACPLMFSGGIRRVVGDFAYLG EEEHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHH VHQITTTYRREKLLYRTTYRIVNGKKKVINTKVVSRKNAGSYKTYEMSKAVEKTLSAYLR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EMGIGDGVLEMMKATPASDIRQIGLDDMTAMKLVTSRDAVDLLTSASLCAPQQPAANCRE HCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHH MPGSANDATPSAAATGRPRNVVPAGPETAKAGADMRFVVVRGSNPLCNPDCPEWISAEGA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCHHHHCCCCC ITSQTPQKLRQLLATLGNRRLPVVISSRGGDLAGALAAGRIIRERKLDVAVGRTDFVDCD CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCC PGAWNCLAKEGAYAGLSIDAGVECDTACALMLAGGARRLVGPQARLSLYPMGQKQMVKAY CCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHCCCCCCEEEECCCHHHHHHHH LEEMAIGPALFKAIAGRSAERQLGPDIMLKAGLTTGPQSVDALTGATICKAVPRPDNCRG HHHHHCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCC LPPANAAADAPAKL CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA