| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470534
Identifier: 13470534
GI number: 13470534
Start: 188190
End: 188672
Strand: Direct
Name: 13470534
Synonym: mlr0267
Alternate gene names: NA
Gene position: 188190-188672 (Clockwise)
Preceding gene: 13470533
Following gene: 13470535
Centisome position: 2.67
GC content: 62.53
Gene sequence:
>483_bases ATGAGCCGGGATGTTCCGACACTCTACGAATGGGCCGGTGGCAGCGATGCCCTGAATCGGCTGACGCAGACCTTCTATGA CAAGGTGGCAAAGGACCCGGTCGTTGGGCCGGTGTTCAAGGCGATGTCGCCGGATCATCCCTCCCACGTCGCGGCCTTCA TCGGCGAGGTCTTTGGTGGACCGAAGACCTATAGCGAGAAATTCGGTGGCCACCGCGAGATGGTCATGCATCATCTGGGC AAGCATCTGACGGAAGAACAGCGCCGCCGCTGGATCAACCTGCTCGCCGACGCAGCCGACGAGGTCGGCTTGCCGGACGA TCCCGAATTCCGTTCCGCCTTCATGGGCTATGTCGAATGGGGATCGCGGCTGGCCAAGATGAACTCCAATCTCGGCGAGA CCTGCGATCCCGAAACCGAGCCGATGCCGGCCTGGGGCTGGGGTGTGCCGGGCGGGCCGTACACGCCGCCGGAAACAAAT TAG
Upstream 100 bases:
>100_bases GTAGAGCGCGGCTTCGGAAGCTGGCCATCGAGGCAGGTTGAGCTGCCTTCGATCTTTCCGCTATCGTCGCGGCCGATGGC GCCGGGGCGGAGGATCGACA
Downstream 100 bases:
>100_bases CTTCCAGCCGCCTCGGAGTGCGGGACTGATGTCGGACGATTTCAAGATCGTGCGCTGGCGCGAGTGGGACGGCCCCGGTA TCGAGCATCTTGAACTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Antibiotic Biosynthesis Monooxygenase; NUDIX Hydrolase; Truncated Hemoglobins-Like Protein; Globin Family Protein; Globin Domain-Containing Protein; Bacterial-Like Globin; Protozoan/Cyanobacterial Globin Family Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSRDVPTLYEWAGGSDALNRLTQTFYDKVAKDPVVGPVFKAMSPDHPSHVAAFIGEVFGGPKTYSEKFGGHREMVMHHLG KHLTEEQRRRWINLLADAADEVGLPDDPEFRSAFMGYVEWGSRLAKMNSNLGETCDPETEPMPAWGWGVPGGPYTPPETN
Sequences:
>Translated_160_residues MSRDVPTLYEWAGGSDALNRLTQTFYDKVAKDPVVGPVFKAMSPDHPSHVAAFIGEVFGGPKTYSEKFGGHREMVMHHLG KHLTEEQRRRWINLLADAADEVGLPDDPEFRSAFMGYVEWGSRLAKMNSNLGETCDPETEPMPAWGWGVPGGPYTPPETN >Mature_159_residues SRDVPTLYEWAGGSDALNRLTQTFYDKVAKDPVVGPVFKAMSPDHPSHVAAFIGEVFGGPKTYSEKFGGHREMVMHHLGK HLTEEQRRRWINLLADAADEVGLPDDPEFRSAFMGYVEWGSRLAKMNSNLGETCDPETEPMPAWGWGVPGGPYTPPETN
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17777; Mature: 17646
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDVPTLYEWAGGSDALNRLTQTFYDKVAKDPVVGPVFKAMSPDHPSHVAAFIGEVFGG CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCC PKTYSEKFGGHREMVMHHLGKHLTEEQRRRWINLLADAADEVGLPDDPEFRSAFMGYVEW CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GSRLAKMNSNLGETCDPETEPMPAWGWGVPGGPYTPPETN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRDVPTLYEWAGGSDALNRLTQTFYDKVAKDPVVGPVFKAMSPDHPSHVAAFIGEVFGG CCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCC PKTYSEKFGGHREMVMHHLGKHLTEEQRRRWINLLADAADEVGLPDDPEFRSAFMGYVEW CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GSRLAKMNSNLGETCDPETEPMPAWGWGVPGGPYTPPETN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA