| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is mrcA [H]
Identifier: 13470492
GI number: 13470492
Start: 149749
End: 152205
Strand: Direct
Name: mrcA [H]
Synonym: mlr0215
Alternate gene names: 13470492
Gene position: 149749-152205 (Clockwise)
Preceding gene: 13470491
Following gene: 13470493
Centisome position: 2.13
GC content: 63.17
Gene sequence:
>2457_bases ATGATTCGTCTCATTGGCTATTTCTTCGGCATCGGCACGACGCTGGCCCTTCTGGTCGCGGCGGGCGTTGCCATTTACAT CAGCCATCTGTCGAAGGATCTGCCCGACTACGAGGTGCTGGCCAAATACGAGCCGCCGGTGACCACCCGCATTCACGCCT CGGACGGCTCGCTGATGGCCGAATATGCGCGCGAGCGGCGGCTATATTTGCCGATCCAGGCCATCCCGGATCGCGTCAAG GCGGCCTTCCTGTCGGCGGAAGACAAGAACTTCTACAATCACCCCGGCATCGACGTGACCGGCCTTGGCCGCGCCATCAT CGTCAACCTGCAGAATTTTGGCTCGGGCAGGCGCCAGGTCGGCGCCTCGACGATCACCCAGCAGGTGGCCAAGAACTTCC TGTTGACCGCGGACCAGACCTACGAGCGCAAGATCAAGGAAATGATCCTGGCCTTCCGCATCGAGCAGGCCTACCCCAAG GATCGTATCCTCGAGCTCTACCTCAACGAAATCTTCTTCGGTTTCGGCGCCTACGGTGTCGCCGGCGCGGCGCTCACCTA CTTCGACAAGTCGGTGAACGAACTGACCGTGGCCGAGGCCGCCTACCTGGCTTCGTTGCCGAAGGGCCCCAACAACTACC ATCCTTTCAAGCATGCCGATCGCGCGATCGAGCGCCGCAACTGGGTCATCGACCAGATGGTCGAAAATGGCTACGTCACG CGTGAGGAAGGCAACAAGGCCAAGGCCGAGCCGCTCGGCGTGACGCCGCGCCGTACCGGCACCTATCTGTTCGCCGGCGA ATACTTCACCGAAGAGGTGCGCCGCCAGATCATCGCCCGTTACGGCGAGAACGCGCTCTACGAAGGCGGCCTGTCCGTCC GCACCACGCTTGATCCGAAAGTCCAGCTCATCGCCCGCAAGGCGATGCAGAACGGCTTGATCAAATACGATACGCTGCGC GGCTATCGCGGGCCGGTGACGTCAATCGACGTGTCCGGCGACTGGGGCGTCCCGCTGGGCGCCGTCAAGGGACTGGAGGA CGTCCCCGAATGGTCGCTGGCCGTCGTGCTCGACTCCTCCGCGTCAGGTCTCTCGATAGGCCTGCAGCCCGCACGCCAGG CATCGGGCGACATCGTCAAGGAACGCGTCGAAGGCACTGTCAGCAAGGACGACATGGGCTTTGCCATGCGCCATATGGTG GACGGCAAGACGGTAAAGGCCAAGTCGCCGGCCGATGTGCTGAAGCCCGGCGACGTCATCTTCGTGCAGAAGAACGAAGG CTCCGACAACACCTACAGCCTGCGCCAGGTTCCCGAGGTGGAAGGCGGCCTGATCGCCATGGATCCGCACACCGGCCGTG TGCTGGCCATGGTCGGCGGTTTCTCCTATGCGCAGTCCGAATTCAACCGCGCCACCCAGGCGATGCGTCAGCCGGGCTCC TCGTTCAAGCCGATCGTCTACTCGGCGGCGCTCGACAATGGCTATACGCCGGCCTCGGTGATCATGGACGGACCGATCAC CATACAGAGCGGCAACACGACCTGGACGCCGAAGAACTATGACGGCACCGTCGCCGGGCCGGCAACGCTGCGTTCCGGCA TCGAGAAGTCGCGCAATTTGATGACGGTGCGGCTTGCCAACGACATGGGCATGAAGCTGGTCGTCGAATATGCCGAGCGC TTTGGTGTCTACGATCATCTGGCGCCGTATCTGCCGATGGCGCTGGGCTCCGGCGAGACCACCGTGATGCGCATGGTTTC GGCCTATTCGATCATGGCCAATGGCGGCAAGTCGATCAAACCGTCGCTGATCGACCGCATCCAGGACCGCTACGGCAAGA CCGTGTTCAAGCAGGATGAGCGTGGCTGCGAAGGCTGCAACGCGCTTGAATGGAAGAACCAGCCAGAGCCGGAACTGGTC GACAATTCCGAGCAGGTGCTCGATCCGATGACCGCTTATCAGATCACCTCGATGATGGAAGGCGTGGTCCAGCGCGGCAC CGGCGCCACCATTGGCGAACTCGGCCGCCACATTGCCGGCAAGACAGGCACCACCAACGACGAAAAGGACGCCTGGTTCA TCGGTTTCACGCCGAACCTCGTGGTTGGCCTCTACATGGGCTACGACACGCCGCGCGGCCTTGGCCACGGCGCCACCGGT GGCGGTCTCGCCGCCCCGATCTTCAAGGATTTCATGCGCGTTGCGCTGGACGGCACGCCCAACGTCGACTTCAAGGTCCC AGACGGCATGAACCTGATCGCCATCAATCGTAAGACCGGCATGCGTGCCGCGTCGGGCGATCCGGGCACCATCATCGAGG CCTTCAAGCCGGGCACCGGTCCCGCCGACAGCTATTGGGTGATCGGCATGGGTGCCGACGGCTCCAACGCGTCGGGCGGC GCACTGTCACCGCAGGCCAACCAGGCCATCCAGGACGGCGGCGGCGGCCTCTACTGA
Upstream 100 bases:
>100_bases TGGCGACATGGGTTTTCGAATACGGATTGGGACCAGCTCGAAAGCTTGCGTGGAAGGCGGCTTCGTTTAGGAAATTCCCG AACCAAGGACTGGAGCGGGT
Downstream 100 bases:
>100_bases CGGGGCCGGATGCGGATCGCTGGGCTGGCTGGGGGCCGGCCCATTTCGCTTTACACATGGCGGCGCCGTCCCTATGTATC GCGCCGACCGAAGTGTCACT
Product: penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MIRLIGYFFGIGTTLALLVAAGVAIYISHLSKDLPDYEVLAKYEPPVTTRIHASDGSLMAEYARERRLYLPIQAIPDRVK AAFLSAEDKNFYNHPGIDVTGLGRAIIVNLQNFGSGRRQVGASTITQQVAKNFLLTADQTYERKIKEMILAFRIEQAYPK DRILELYLNEIFFGFGAYGVAGAALTYFDKSVNELTVAEAAYLASLPKGPNNYHPFKHADRAIERRNWVIDQMVENGYVT REEGNKAKAEPLGVTPRRTGTYLFAGEYFTEEVRRQIIARYGENALYEGGLSVRTTLDPKVQLIARKAMQNGLIKYDTLR GYRGPVTSIDVSGDWGVPLGAVKGLEDVPEWSLAVVLDSSASGLSIGLQPARQASGDIVKERVEGTVSKDDMGFAMRHMV DGKTVKAKSPADVLKPGDVIFVQKNEGSDNTYSLRQVPEVEGGLIAMDPHTGRVLAMVGGFSYAQSEFNRATQAMRQPGS SFKPIVYSAALDNGYTPASVIMDGPITIQSGNTTWTPKNYDGTVAGPATLRSGIEKSRNLMTVRLANDMGMKLVVEYAER FGVYDHLAPYLPMALGSGETTVMRMVSAYSIMANGGKSIKPSLIDRIQDRYGKTVFKQDERGCEGCNALEWKNQPEPELV DNSEQVLDPMTAYQITSMMEGVVQRGTGATIGELGRHIAGKTGTTNDEKDAWFIGFTPNLVVGLYMGYDTPRGLGHGATG GGLAAPIFKDFMRVALDGTPNVDFKVPDGMNLIAINRKTGMRAASGDPGTIIEAFKPGTGPADSYWVIGMGADGSNASGG ALSPQANQAIQDGGGGLY
Sequences:
>Translated_818_residues MIRLIGYFFGIGTTLALLVAAGVAIYISHLSKDLPDYEVLAKYEPPVTTRIHASDGSLMAEYARERRLYLPIQAIPDRVK AAFLSAEDKNFYNHPGIDVTGLGRAIIVNLQNFGSGRRQVGASTITQQVAKNFLLTADQTYERKIKEMILAFRIEQAYPK DRILELYLNEIFFGFGAYGVAGAALTYFDKSVNELTVAEAAYLASLPKGPNNYHPFKHADRAIERRNWVIDQMVENGYVT REEGNKAKAEPLGVTPRRTGTYLFAGEYFTEEVRRQIIARYGENALYEGGLSVRTTLDPKVQLIARKAMQNGLIKYDTLR GYRGPVTSIDVSGDWGVPLGAVKGLEDVPEWSLAVVLDSSASGLSIGLQPARQASGDIVKERVEGTVSKDDMGFAMRHMV DGKTVKAKSPADVLKPGDVIFVQKNEGSDNTYSLRQVPEVEGGLIAMDPHTGRVLAMVGGFSYAQSEFNRATQAMRQPGS SFKPIVYSAALDNGYTPASVIMDGPITIQSGNTTWTPKNYDGTVAGPATLRSGIEKSRNLMTVRLANDMGMKLVVEYAER FGVYDHLAPYLPMALGSGETTVMRMVSAYSIMANGGKSIKPSLIDRIQDRYGKTVFKQDERGCEGCNALEWKNQPEPELV DNSEQVLDPMTAYQITSMMEGVVQRGTGATIGELGRHIAGKTGTTNDEKDAWFIGFTPNLVVGLYMGYDTPRGLGHGATG GGLAAPIFKDFMRVALDGTPNVDFKVPDGMNLIAINRKTGMRAASGDPGTIIEAFKPGTGPADSYWVIGMGADGSNASGG ALSPQANQAIQDGGGGLY >Mature_818_residues MIRLIGYFFGIGTTLALLVAAGVAIYISHLSKDLPDYEVLAKYEPPVTTRIHASDGSLMAEYARERRLYLPIQAIPDRVK AAFLSAEDKNFYNHPGIDVTGLGRAIIVNLQNFGSGRRQVGASTITQQVAKNFLLTADQTYERKIKEMILAFRIEQAYPK DRILELYLNEIFFGFGAYGVAGAALTYFDKSVNELTVAEAAYLASLPKGPNNYHPFKHADRAIERRNWVIDQMVENGYVT REEGNKAKAEPLGVTPRRTGTYLFAGEYFTEEVRRQIIARYGENALYEGGLSVRTTLDPKVQLIARKAMQNGLIKYDTLR GYRGPVTSIDVSGDWGVPLGAVKGLEDVPEWSLAVVLDSSASGLSIGLQPARQASGDIVKERVEGTVSKDDMGFAMRHMV DGKTVKAKSPADVLKPGDVIFVQKNEGSDNTYSLRQVPEVEGGLIAMDPHTGRVLAMVGGFSYAQSEFNRATQAMRQPGS SFKPIVYSAALDNGYTPASVIMDGPITIQSGNTTWTPKNYDGTVAGPATLRSGIEKSRNLMTVRLANDMGMKLVVEYAER FGVYDHLAPYLPMALGSGETTVMRMVSAYSIMANGGKSIKPSLIDRIQDRYGKTVFKQDERGCEGCNALEWKNQPEPELV DNSEQVLDPMTAYQITSMMEGVVQRGTGATIGELGRHIAGKTGTTNDEKDAWFIGFTPNLVVGLYMGYDTPRGLGHGATG GGLAAPIFKDFMRVALDGTPNVDFKVPDGMNLIAINRKTGMRAASGDPGTIIEAFKPGTGPADSYWVIGMGADGSNASGG ALSPQANQAIQDGGGGLY
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=848, Percent_Identity=33.9622641509434, Blast_Score=444, Evalue=1e-125, Organism=Escherichia coli, GI1786343, Length=276, Percent_Identity=34.4202898550725, Blast_Score=155, Evalue=9e-39, Organism=Escherichia coli, GI1788867, Length=211, Percent_Identity=32.7014218009479, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1789601, Length=169, Percent_Identity=36.094674556213, Blast_Score=97, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 88671; Mature: 88671
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLIGYFFGIGTTLALLVAAGVAIYISHLSKDLPDYEVLAKYEPPVTTRIHASDGSLMA CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEECCCCHHHH EYARERRLYLPIQAIPDRVKAAFLSAEDKNFYNHPGIDVTGLGRAIIVNLQNFGSGRRQV HHHHCCEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEHHCCCCHHHH GASTITQQVAKNFLLTADQTYERKIKEMILAFRIEQAYPKDRILELYLNEIFFGFGAYGV HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH AGAALTYFDKSVNELTVAEAAYLASLPKGPNNYHPFKHADRAIERRNWVIDQMVENGYVT HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE REEGNKAKAEPLGVTPRRTGTYLFAGEYFTEEVRRQIIARYGENALYEGGLSVRTTLDPK CCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCHH VQLIARKAMQNGLIKYDTLRGYRGPVTSIDVSGDWGVPLGAVKGLEDVPEWSLAVVLDSS HHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEEECC ASGLSIGLQPARQASGDIVKERVEGTVSKDDMGFAMRHMVDGKTVKAKSPADVLKPGDVI CCCCEECCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHCCCCCEE FVQKNEGSDNTYSLRQVPEVEGGLIAMDPHTGRVLAMVGGFSYAQSEFNRATQAMRQPGS EEECCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC SFKPIVYSAALDNGYTPASVIMDGPITIQSGNTTWTPKNYDGTVAGPATLRSGIEKSRNL CCCCEEEEEECCCCCCCHHEEECCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCE MTVRLANDMGMKLVVEYAERFGVYDHLAPYLPMALGSGETTVMRMVSAYSIMANGGKSIK EEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC PSLIDRIQDRYGKTVFKQDERGCEGCNALEWKNQPEPELVDNSEQVLDPMTAYQITSMME HHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHH GVVQRGTGATIGELGRHIAGKTGTTNDEKDAWFIGFTPNLVVGLYMGYDTPRGLGHGATG HHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC GGLAAPIFKDFMRVALDGTPNVDFKVPDGMNLIAINRKTGMRAASGDPGTIIEAFKPGTG CCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCC PADSYWVIGMGADGSNASGGALSPQANQAIQDGGGGLY CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MIRLIGYFFGIGTTLALLVAAGVAIYISHLSKDLPDYEVLAKYEPPVTTRIHASDGSLMA CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCEEEEECCCCHHHH EYARERRLYLPIQAIPDRVKAAFLSAEDKNFYNHPGIDVTGLGRAIIVNLQNFGSGRRQV HHHHCCEEEEEHHHCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEHHCCCCHHHH GASTITQQVAKNFLLTADQTYERKIKEMILAFRIEQAYPKDRILELYLNEIFFGFGAYGV HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH AGAALTYFDKSVNELTVAEAAYLASLPKGPNNYHPFKHADRAIERRNWVIDQMVENGYVT HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE REEGNKAKAEPLGVTPRRTGTYLFAGEYFTEEVRRQIIARYGENALYEGGLSVRTTLDPK CCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCHH VQLIARKAMQNGLIKYDTLRGYRGPVTSIDVSGDWGVPLGAVKGLEDVPEWSLAVVLDSS HHHHHHHHHHCCCEEEECCCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCCEEEEEEECC ASGLSIGLQPARQASGDIVKERVEGTVSKDDMGFAMRHMVDGKTVKAKSPADVLKPGDVI CCCCEECCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHCCCCCEE FVQKNEGSDNTYSLRQVPEVEGGLIAMDPHTGRVLAMVGGFSYAQSEFNRATQAMRQPGS EEECCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC SFKPIVYSAALDNGYTPASVIMDGPITIQSGNTTWTPKNYDGTVAGPATLRSGIEKSRNL CCCCEEEEEECCCCCCCHHEEECCCEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCE MTVRLANDMGMKLVVEYAERFGVYDHLAPYLPMALGSGETTVMRMVSAYSIMANGGKSIK EEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC PSLIDRIQDRYGKTVFKQDERGCEGCNALEWKNQPEPELVDNSEQVLDPMTAYQITSMME HHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHH GVVQRGTGATIGELGRHIAGKTGTTNDEKDAWFIGFTPNLVVGLYMGYDTPRGLGHGATG HHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC GGLAAPIFKDFMRVALDGTPNVDFKVPDGMNLIAINRKTGMRAASGDPGTIIEAFKPGTG CCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCC PADSYWVIGMGADGSNASGGALSPQANQAIQDGGGGLY CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]