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The map label for this gene is ychJ [C]

Identifier: 15603482

GI number: 15603482

Start: 1826405

End: 1826878

Strand: Reverse

Name: ychJ [C]

Synonym: PM1617

Alternate gene names: 15603482

Gene position: 1826878-1826405 (Counterclockwise)

Preceding gene: 15603483

Following gene: 15603481

Centisome position: 80.93

GC content: 41.14

Gene sequence:

>474_bases
ATGACTGAAAAATTAACCGCACTTTGTCCCTGTCAATCGGGACAACTCTATCAAGCCTGTTGTCAGCCATATCATCAACA
GCAACAATTTCCTGCTAATGCGATGTTATTGATGCGTTCCCGTTATGCCGCGTATGCCTTGAAAAATATTGATTACATTG
TGCAAACTACTGTGCCAAATCAACAAGCGTTGTTGCCCGTCGCCGCATTACAAGACTGGGCGGACAAGACAACTTGGGTT
GGACTTGACATTTTGCAACATGTCTCCCTGTCTAAAACACATAGCCAAGTCGAATTTAAGGCTTTCTTTGCTCAACAAAA
TCAAACACAAGTGCATCATGAAATCTCTTTATTTGTGAACATTGCACAACGTTGGTATTTTGTCGATCCCACGGTGACAT
TACCGAATATGAAACAACCTTGCCTGTGTGGCTCAAATAAAAAATTTAAACATTGTTGTGGAGGTTTACTGTGA

Upstream 100 bases:

>100_bases
AGTGTAAAGATAAAACGCTTCAACTGATTGAATAAAACATTATTCAAATAAAAAGCGCTTGGTAATAAGTTTAGCTTGAA
ATAACGATGACTCTGTAAAA

Downstream 100 bases:

>100_bases
ACAACGTTTTAAAAAATGCTGGACTTTTTTTAAGATTATTTTGGCTTCGTTTTCAACAAAACAAATTAAGCCAAGCAGCT
GGCTACTTAACTTACAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTEKLTALCPCQSGQLYQACCQPYHQQQQFPANAMLLMRSRYAAYALKNIDYIVQTTVPNQQALLPVAALQDWADKTTWV
GLDILQHVSLSKTHSQVEFKAFFAQQNQTQVHHEISLFVNIAQRWYFVDPTVTLPNMKQPCLCGSNKKFKHCCGGLL

Sequences:

>Translated_157_residues
MTEKLTALCPCQSGQLYQACCQPYHQQQQFPANAMLLMRSRYAAYALKNIDYIVQTTVPNQQALLPVAALQDWADKTTWV
GLDILQHVSLSKTHSQVEFKAFFAQQNQTQVHHEISLFVNIAQRWYFVDPTVTLPNMKQPCLCGSNKKFKHCCGGLL
>Mature_156_residues
TEKLTALCPCQSGQLYQACCQPYHQQQQFPANAMLLMRSRYAAYALKNIDYIVQTTVPNQQALLPVAALQDWADKTTWVG
LDILQHVSLSKTHSQVEFKAFFAQQNQTQVHHEISLFVNIAQRWYFVDPTVTLPNMKQPCLCGSNKKFKHCCGGLL

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=151, Percent_Identity=35.0993377483444, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1617_PASMU (Q9CKJ8)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246556.1
- ProteinModelPortal:   Q9CKJ8
- SMR:   Q9CKJ8
- GeneID:   1244964
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1617
- NMPDR:   fig|272843.1.peg.1618
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   PRK01752
- BioCyc:   PMUL272843:PM1617-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17864; Mature: 17733

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKLTALCPCQSGQLYQACCQPYHQQQQFPANAMLLMRSRYAAYALKNIDYIVQTTVPN
CCCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC
QQALLPVAALQDWADKTTWVGLDILQHVSLSKTHSQVEFKAFFAQQNQTQVHHEISLFVN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IAQRWYFVDPTVTLPNMKQPCLCGSNKKFKHCCGGLL
HHHHEEEECCEEECCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TEKLTALCPCQSGQLYQACCQPYHQQQQFPANAMLLMRSRYAAYALKNIDYIVQTTVPN
CCCCCEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC
QQALLPVAALQDWADKTTWVGLDILQHVSLSKTHSQVEFKAFFAQQNQTQVHHEISLFVN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IAQRWYFVDPTVTLPNMKQPCLCGSNKKFKHCCGGLL
HHHHEEEECCEEECCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100