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The map label for this gene is yggA [C]

Identifier: 15603483

GI number: 15603483

Start: 1826972

End: 1827652

Strand: Reverse

Name: yggA [C]

Synonym: PM1618

Alternate gene names: 15603483

Gene position: 1827652-1826972 (Counterclockwise)

Preceding gene: 15603489

Following gene: 15603482

Centisome position: 80.96

GC content: 39.65

Gene sequence:

>681_bases
TTGCGTTTAGTGTACTACTTTATGTTTAAATTATTAAGGAAATTCTTTATGGAACACCTTTTACAAGGCTTTTTTGTGAC
GGCGGGGTTGATTATCGCCATTGGGGCGCAAAATGCCTTTGTATTAAAACAGGGATTACTTAAACAGAATATTCTGGCTG
TGATTTTAACCTGTTTTTTCTGCGATATTGTATTAATTTCCTTAGGGGTATTGGGATTAGGTTCCCTAATCAGCCAAAGC
ACTATGGCAACTGTCGCCTTAGCCTTTGTCGGAGGTGGTTTTTTATTGATTTATGGTTTAAAAGCCTTTTTATCTGCTTA
TCGAGGCAACGCGTCATTACAATTAGCAAAAGCGGATAAACAACCACAAACCACTTTGCATGCGATCATTGCTACCCTAC
TGATTACGCTGTTAAATCCACATGTCTATTTAGATACTGTGGTCATTATTGGTGGTATTGCTGGCACACTTGCCTTTGAC
GAGAAGCTGTTTTTTCTGGTTGGTGCCTTGTTAGTATCGGCTCTCTGGTTTTTTAGCTTGGGCTATGGCGCACGCTTATT
AAGCCGATTTTTCCAACGACCAGTAACATGGCGAATTTTGGATTTGGTGATTGGGGTAATTATGTGGGCAATTGCAATTA
GCTTGATACATTATGGCATCACTTTATTCCCCACAGTGTAA

Upstream 100 bases:

>100_bases
TAAATCCGCAGATAAGATTGAAGGGGCAATTAAATAGGGTTTCATCATTGACCTCACTGGTAAACAAGTTGTTAAATTAA
ACACTTGCAAAGAGAAAATA

Downstream 100 bases:

>100_bases
AGATAAAACGCTTCAACTGATTGAATAAAACATTATTCAAATAAAAAGCGCTTGGTAATAAGTTTAGCTTGAAATAACGA
TGACTCTGTAAAAATGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRLVYYFMFKLLRKFFMEHLLQGFFVTAGLIIAIGAQNAFVLKQGLLKQNILAVILTCFFCDIVLISLGVLGLGSLISQS
TMATVALAFVGGGFLLIYGLKAFLSAYRGNASLQLAKADKQPQTTLHAIIATLLITLLNPHVYLDTVVIIGGIAGTLAFD
EKLFFLVGALLVSALWFFSLGYGARLLSRFFQRPVTWRILDLVIGVIMWAIAISLIHYGITLFPTV

Sequences:

>Translated_226_residues
MRLVYYFMFKLLRKFFMEHLLQGFFVTAGLIIAIGAQNAFVLKQGLLKQNILAVILTCFFCDIVLISLGVLGLGSLISQS
TMATVALAFVGGGFLLIYGLKAFLSAYRGNASLQLAKADKQPQTTLHAIIATLLITLLNPHVYLDTVVIIGGIAGTLAFD
EKLFFLVGALLVSALWFFSLGYGARLLSRFFQRPVTWRILDLVIGVIMWAIAISLIHYGITLFPTV
>Mature_226_residues
MRLVYYFMFKLLRKFFMEHLLQGFFVTAGLIIAIGAQNAFVLKQGLLKQNILAVILTCFFCDIVLISLGVLGLGSLISQS
TMATVALAFVGGGFLLIYGLKAFLSAYRGNASLQLAKADKQPQTTLHAIIATLLITLLNPHVYLDTVVIIGGIAGTLAFD
EKLFFLVGALLVSALWFFSLGYGARLLSRFFQRPVTWRILDLVIGVIMWAIAISLIHYGITLFPTV

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=205, Percent_Identity=39.0243902439024, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 24841; Mature: 24841

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVYYFMFKLLRKFFMEHLLQGFFVTAGLIIAIGAQNAFVLKQGLLKQNILAVILTCFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CDIVLISLGVLGLGSLISQSTMATVALAFVGGGFLLIYGLKAFLSAYRGNASLQLAKADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCC
QPQTTLHAIIATLLITLLNPHVYLDTVVIIGGIAGTLAFDEKLFFLVGALLVSALWFFSL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYGARLLSRFFQRPVTWRILDLVIGVIMWAIAISLIHYGITLFPTV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLVYYFMFKLLRKFFMEHLLQGFFVTAGLIIAIGAQNAFVLKQGLLKQNILAVILTCFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CDIVLISLGVLGLGSLISQSTMATVALAFVGGGFLLIYGLKAFLSAYRGNASLQLAKADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCC
QPQTTLHAIIATLLITLLNPHVYLDTVVIIGGIAGTLAFDEKLFFLVGALLVSALWFFSL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYGARLLSRFFQRPVTWRILDLVIGVIMWAIAISLIHYGITLFPTV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]