| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603448
Identifier: 15603448
GI number: 15603448
Start: 1793560
End: 1794174
Strand: Reverse
Name: 15603448
Synonym: PM1583
Alternate gene names: NA
Gene position: 1794174-1793560 (Counterclockwise)
Preceding gene: 15603449
Following gene: 15603446
Centisome position: 79.48
GC content: 41.79
Gene sequence:
>615_bases ATGCCTATCAATACATTTTGCAAAATCAGTTTATTCATCTGTGCGTTATTCTGTTCAACAGTAACCCTCGCTAATCCCAA TGTTTATGTAGAAGGTCCCTCTATTGAAAATGTGATGCGTGCAAGCTCGTATGTTTCCTATACTTATCGCACAGAAGCAA AACGGCATCAATGGGTGGGAAATGATGACCTATTTTTTATTCGCTTATCGAGTATTGATACGTTTGGCGACCAACGCTCC GCCTTAATTGCAAGCCTCTCCCCACATAGCTACAGTATTGAACGCGTTAGCACAAACTGTAAAACTAAAGACACCATTAT CAACACCCGAACCCGTTATGATGTTAACGGCAAAGTATTAGAATCCAATAAAGAAGAAGAGAAAATCGGACGACCTATTC CAGATAGTTATCTGGCTGAGGCCGTGATTGTGATGTGTGATGCCCTTGCCATTATCCCTGCTAATCCCAATGTAGATGGT GAAAAAATCACCGCCTCAGCGCCTTTTATGAATGTCATCAATGAGCATGTCCGCGCCAAAGGCGTGACTCGCCGTGCGAT AACAGTAGAGCAAATTGAAGCACATTTCAAAACCACATTAAATCAACGAAAATAA
Upstream 100 bases:
>100_bases GATCGACTTTGGCTTTTTTGTTTTCATACAAATAGATTATAAAATATCAGCAAGAATGGTATAGTAATCCCTCTCTAATC TCGGCTTATTGGAGCAATTT
Downstream 100 bases:
>100_bases ACAAAAAAGGACGTGCCAATCCACGTCCTTTCCTGTTCCCACGTTTACTTACTCCAGTAGTCCTTCGAGTTCCTCTTGTA ACGCGAGCCAATCCATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPINTFCKISLFICALFCSTVTLANPNVYVEGPSIENVMRASSYVSYTYRTEAKRHQWVGNDDLFFIRLSSIDTFGDQRS ALIASLSPHSYSIERVSTNCKTKDTIINTRTRYDVNGKVLESNKEEEKIGRPIPDSYLAEAVIVMCDALAIIPANPNVDG EKITASAPFMNVINEHVRAKGVTRRAITVEQIEAHFKTTLNQRK
Sequences:
>Translated_204_residues MPINTFCKISLFICALFCSTVTLANPNVYVEGPSIENVMRASSYVSYTYRTEAKRHQWVGNDDLFFIRLSSIDTFGDQRS ALIASLSPHSYSIERVSTNCKTKDTIINTRTRYDVNGKVLESNKEEEKIGRPIPDSYLAEAVIVMCDALAIIPANPNVDG EKITASAPFMNVINEHVRAKGVTRRAITVEQIEAHFKTTLNQRK >Mature_203_residues PINTFCKISLFICALFCSTVTLANPNVYVEGPSIENVMRASSYVSYTYRTEAKRHQWVGNDDLFFIRLSSIDTFGDQRSA LIASLSPHSYSIERVSTNCKTKDTIINTRTRYDVNGKVLESNKEEEKIGRPIPDSYLAEAVIVMCDALAIIPANPNVDGE KITASAPFMNVINEHVRAKGVTRRAITVEQIEAHFKTTLNQRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1583_PASMU (Q9CKM8)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246522.1 - GeneID: 1244930 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1583 - NMPDR: fig|272843.1.peg.1584 - BioCyc: PMUL272843:PM1583-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22867; Mature: 22736
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINTFCKISLFICALFCSTVTLANPNVYVEGPSIENVMRASSYVSYTYRTEAKRHQWVG CCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHEEEEEECCCHHHCCCC NDDLFFIRLSSIDTFGDQRSALIASLSPHSYSIERVSTNCKTKDTIINTRTRYDVNGKVL CCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEECCEEECCCCEEE ESNKEEEKIGRPIPDSYLAEAVIVMCDALAIIPANPNVDGEKITASAPFMNVINEHVRAK CCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHC GVTRRAITVEQIEAHFKTTLNQRK CCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PINTFCKISLFICALFCSTVTLANPNVYVEGPSIENVMRASSYVSYTYRTEAKRHQWVG CCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHEEEEEECCCHHHCCCC NDDLFFIRLSSIDTFGDQRSALIASLSPHSYSIERVSTNCKTKDTIINTRTRYDVNGKVL CCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEECCEEECCCCEEE ESNKEEEKIGRPIPDSYLAEAVIVMCDALAIIPANPNVDGEKITASAPFMNVINEHVRAK CCCCCHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHC GVTRRAITVEQIEAHFKTTLNQRK CCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100