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The map label for this gene is ychE [C]

Identifier: 15603446

GI number: 15603446

Start: 1790900

End: 1791517

Strand: Reverse

Name: ychE [C]

Synonym: PM1581

Alternate gene names: 15603446

Gene position: 1791517-1790900 (Counterclockwise)

Preceding gene: 15603448

Following gene: 15603441

Centisome position: 79.36

GC content: 43.2

Gene sequence:

>618_bases
ATGTTTGATTCGTTAATCGTGCAATTTGTTGTATTGTGGGCAGTAATCGACCCAATTGGATCCGTACCGGTTTATTTGAC
CAAAACCGTAGGGCTATCGCTAGAAGATAGACGTAAAATTGCCTTAAAAGCGGTAGTGATCGCAACGGGGATCTTAATGT
TCTTTTTGATTCTAGGTCAGGGGCTATTAGAAGCGATGCAAATTCCGCTCACCGCGTTCCAAATTGCCGGGGGCTTAGTG
TTACTGTTATTCGCCTTAACCATGATTTTTGGTGAAGGTAAGCCAGAACATGAAATGCGTATGACATCCAGTTTAAGTGA
GCTGGCGGTTTATCCTCTTGCGGTGCCGTCCATTGCTTCACCGGGTGCGATGATGGCAATCGTATTATTGACCGATAATC
ATCGGTTCAGTTTTTTCGATCAAGTTATCACCACTGTGATTATGCTTTCCATTTTATTTATCACTTACCTGCTTTTCTTG
ATGGCAAACCGTATTCAACGTTTAATTGGTAACACTGGCGCTGCCGTAATAAGCCGGGTCATGGGATTAATCCTTGCTGC
CGTGGCGATCAATAATATGTTAGTGGGAATTCGTGACTTTTTTACGCAAGTGGTGTAA

Upstream 100 bases:

>100_bases
TTTAATGTTAAATTTGTAAAAAAAAGCATGCGTTCTCGTATGTCTTGTTCAACTTTTATTATAGAATGAGCTATTCTCTA
CTTTTTTATCGGAGTTGCCA

Downstream 100 bases:

>100_bases
TCACAACAACGACGAATATACGGTGAATTCATACCGATTTCTCCCTGCATTCCAACAACAAAAAGGCGATAGATAATCGC
CTTTTTGTTTATGTACCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFDSLIVQFVVLWAVIDPIGSVPVYLTKTVGLSLEDRRKIALKAVVIATGILMFFLILGQGLLEAMQIPLTAFQIAGGLV
LLLFALTMIFGEGKPEHEMRMTSSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSFFDQVITTVIMLSILFITYLLFL
MANRIQRLIGNTGAAVISRVMGLILAAVAINNMLVGIRDFFTQVV

Sequences:

>Translated_205_residues
MFDSLIVQFVVLWAVIDPIGSVPVYLTKTVGLSLEDRRKIALKAVVIATGILMFFLILGQGLLEAMQIPLTAFQIAGGLV
LLLFALTMIFGEGKPEHEMRMTSSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSFFDQVITTVIMLSILFITYLLFL
MANRIQRLIGNTGAAVISRVMGLILAAVAINNMLVGIRDFFTQVV
>Mature_205_residues
MFDSLIVQFVVLWAVIDPIGSVPVYLTKTVGLSLEDRRKIALKAVVIATGILMFFLILGQGLLEAMQIPLTAFQIAGGLV
LLLFALTMIFGEGKPEHEMRMTSSLSELAVYPLAVPSIASPGAMMAIVLLTDNHRFSFFDQVITTVIMLSILFITYLLFL
MANRIQRLIGNTGAAVISRVMGLILAAVAINNMLVGIRDFFTQVV

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=32.3232323232323, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789842, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=27.319587628866, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22378; Mature: 22378

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSLIVQFVVLWAVIDPIGSVPVYLTKTVGLSLEDRRKIALKAVVIATGILMFFLILGQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLEAMQIPLTAFQIAGGLVLLLFALTMIFGEGKPEHEMRMTSSLSELAVYPLAVPSIAS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PGAMMAIVLLTDNHRFSFFDQVITTVIMLSILFITYLLFLMANRIQRLIGNTGAAVISRV
CCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MGLILAAVAINNMLVGIRDFFTQVV
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDSLIVQFVVLWAVIDPIGSVPVYLTKTVGLSLEDRRKIALKAVVIATGILMFFLILGQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLEAMQIPLTAFQIAGGLVLLLFALTMIFGEGKPEHEMRMTSSLSELAVYPLAVPSIAS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PGAMMAIVLLTDNHRFSFFDQVITTVIMLSILFITYLLFLMANRIQRLIGNTGAAVISRV
CCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MGLILAAVAINNMLVGIRDFFTQVV
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]