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The map label for this gene is asnC [H]

Identifier: 15603438

GI number: 15603438

Start: 1782023

End: 1782475

Strand: Reverse

Name: asnC [H]

Synonym: PM1573

Alternate gene names: 15603438

Gene position: 1782475-1782023 (Counterclockwise)

Preceding gene: 15603440

Following gene: 15603437

Centisome position: 78.96

GC content: 37.09

Gene sequence:

>453_bases
ATGCACAATATTGATAATCTTGATCAGCAAATATTGCGTGTTTTAACTAAAGATGCACGTACGCCTTACGCTGAAATGGC
AAAAAATTTCGGTGTGAGCCCAGGAACTATCCATGTACGCGTGGAAAAAATGCGCCAAGCAGGCATCATAGAAGGCACAA
AAGTGCGTATAAATGAACGTAAACTGGGTTACGATGTATGCTGTTTTATCGGGATCATTTTAAAAAGTGCAAAAGATTAC
GATAAAGTAATCAAAAAACTGGAGGGCTTTGATGAAGTTGTTGAGGCTTACTATACCACGGGAAATTACTCGATTTTTAT
TAAAGTGATGACCCACACAATCGCAGAGTTACATTCTGTATTAGCCTCAAAAATTCAGTTAATTGATGAAATTCAATCGA
CTGAGACCTTAATCTCAATGCAAAATCCAATTTTGCGTGATATTAAACCCTAG

Upstream 100 bases:

>100_bases
AGCCCTATAACTCAATACTTTTTTTGAAATAAGCGATATACTTTGAATTTTATACAATATAACGTATTTATTTTTGAAAA
AATTCTAAAAAAGGTCAACT

Downstream 100 bases:

>100_bases
CATAATAAAATAAGGAGATATTATGTCAGAAGTATTCCATCTAGGTTTAACCAAAGCGATGTTAGAAGGCGCCACTTTAG
CGATTACCCCAGGCGCCCCA

Product: DNA-binding transcriptional regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MHNIDNLDQQILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQAGIIEGTKVRINERKLGYDVCCFIGIILKSAKDY
DKVIKKLEGFDEVVEAYYTTGNYSIFIKVMTHTIAELHSVLASKIQLIDEIQSTETLISMQNPILRDIKP

Sequences:

>Translated_150_residues
MHNIDNLDQQILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQAGIIEGTKVRINERKLGYDVCCFIGIILKSAKDY
DKVIKKLEGFDEVVEAYYTTGNYSIFIKVMTHTIAELHSVLASKIQLIDEIQSTETLISMQNPILRDIKP
>Mature_150_residues
MHNIDNLDQQILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQAGIIEGTKVRINERKLGYDVCCFIGIILKSAKDY
DKVIKKLEGFDEVVEAYYTTGNYSIFIKVMTHTIAELHSVLASKIQLIDEIQSTETLISMQNPILRDIKP

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=147, Percent_Identity=69.3877551020408, Blast_Score=210, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17056; Mature: 17056

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNIDNLDQQILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQAGIIEGTKVRINER
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEEECCC
KLGYDVCCFIGIILKSAKDYDKVIKKLEGFDEVVEAYYTTGNYSIFIKVMTHTIAELHSV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
LASKIQLIDEIQSTETLISMQNPILRDIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MHNIDNLDQQILRVLTKDARTPYAEMAKNFGVSPGTIHVRVEKMRQAGIIEGTKVRINER
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEEECCC
KLGYDVCCFIGIILKSAKDYDKVIKKLEGFDEVVEAYYTTGNYSIFIKVMTHTIAELHSV
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
LASKIQLIDEIQSTETLISMQNPILRDIKP
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]