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The map label for this gene is atpC

Identifier: 15603360

GI number: 15603360

Start: 1686766

End: 1687194

Strand: Direct

Name: atpC

Synonym: PM1495

Alternate gene names: 15603360

Gene position: 1686766-1687194 (Clockwise)

Preceding gene: 15603359

Following gene: 15603362

Centisome position: 74.72

GC content: 39.63

Gene sequence:

>429_bases
ATGTCAGTATTTAACTTAACCGTAGTAAGTGCAGAGCAACAGATTTTTTCTGGTCAAGTAGAGAGTATTCAAGCAACAGG
TATTGAGGGTGAACTGGGTATTTTAGCTGGTCACACCCCACTCCTTACGGCGATTAAACCCGGTATTGTGAAATTAACTC
TTGAAGACGGAAAAGAAGAAGTGATCTATGTCTCGGGTGGTTTTTTAGAAGTTCAACCCAATGTGGTTACCGTATTAGCG
GATACGGCGATTCGTGGTGATGAATTAGATGGCGATCGTATTTTAGCTGCTAAAAAACGTGCAGAAGAAAATATTCGTAC
GCGTCATGGCGATGCTAATTATGAAATGTTGGCGTCGAAACTGTCTAAAGAATTAGCGAAACTCCGTGCTTATGAATTAA
CGGAAAAATTAGTTAAAAATAAACGCTAA

Upstream 100 bases:

>100_bases
CAAGCGTTCTATATGGCGGGTACCATCGACGAAGTATTAGAAAAAGCGAAAAAATTGTAATTGCTTCTGAAAGCAACTAA
TCAGGCTTGAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TTTGACCGCACTTTAAATACCAAAAAGACCACATCATGTGGTCTTTCTTTTTCAATTTTATTTGCCTTTTTTTACCCAAT
ATTGAAAGGGAATATGTTCA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSVFNLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEEVIYVSGGFLEVQPNVVTVLA
DTAIRGDELDGDRILAAKKRAEENIRTRHGDANYEMLASKLSKELAKLRAYELTEKLVKNKR

Sequences:

>Translated_142_residues
MSVFNLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEEVIYVSGGFLEVQPNVVTVLA
DTAIRGDELDGDRILAAKKRAEENIRTRHGDANYEMLASKLSKELAKLRAYELTEKLVKNKR
>Mature_141_residues
SVFNLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEEVIYVSGGFLEVQPNVVTVLAD
TAIRGDELDGDRILAAKKRAEENIRTRHGDANYEMLASKLSKELAKLRAYELTEKLVKNKR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=133, Percent_Identity=60.1503759398496, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_PASMU (Q9CKW0)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246434.1
- ProteinModelPortal:   Q9CKW0
- SMR:   Q9CKW0
- GeneID:   1244842
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1495
- NMPDR:   fig|272843.1.peg.1496
- HOGENOM:   HBG663981
- OMA:   EMVSVRA
- ProtClustDB:   PRK00571
- BioCyc:   PMUL272843:PM1495-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15492; Mature: 15361

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFNLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEE
CCEEEEEEEECHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCCEEEEEEECCCEE
VIYVSGGFLEVQPNVVTVLADTAIRGDELDGDRILAAKKRAEENIRTRHGDANYEMLASK
EEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHH
LSKELAKLRAYELTEKLVKNKR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVFNLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEE
CEEEEEEEECHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCCEEEEEEECCCEE
VIYVSGGFLEVQPNVVTVLADTAIRGDELDGDRILAAKKRAEENIRTRHGDANYEMLASK
EEEEECCEEEECCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHH
LSKELAKLRAYELTEKLVKNKR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100