| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yigZ [C]
Identifier: 15603362
GI number: 15603362
Start: 1687569
End: 1688177
Strand: Direct
Name: yigZ [C]
Synonym: PM1497
Alternate gene names: 15603362
Gene position: 1687569-1688177 (Clockwise)
Preceding gene: 15603360
Following gene: 15603363
Centisome position: 74.75
GC content: 39.74
Gene sequence:
>609_bases ATGATTGAATATAAAATCCCAAAAAGTGCGGTCATTTTTGAAGAAGAAATCAAAAAAAGCCGTTTCATCACTTATCTTCA ACATGTAGAAAACCTAACACAAGCAAAGGCATTTTGGCAACAAATCAAATCCCAACACCCTCAAGCACGACATCATTGTT GGGCAACCATTGCTGGCGCGCCCAACGATTCACAACAATTTGGTTTTTCCGATGATGGTGAACCGGCCGGTACAGCAGGT AAGCCGATGTTGTCTGCTTTACAAGGTAGTAAGATTGGTGAAATTTGTGCTGTGGTTGTGCGTTATTATGGCGGCATTTT ATTGGGAACGGGAGGGTTAGTCCGTGCTTATGGCAACGGTGTGCAACAAGCACTGACGTTATTAGAAACCGTAGTAAAAG TGCAACGTCAATCTTACAAAGTGCACTGTGATTATAGTCATATTAATGCGTTACAACTACTTTGTGAAAAACAGGATGTG ATGATCATAAATCAACATTTTGTTGATCGTGTAGCATTTGAGTTAGGGATCAGAGATGATAAACTGACAGCATTTGAACA AGCCTTAATTGAACGTTTTAGTGGACAGTTACAATTAGAAAGAGAGTAA
Upstream 100 bases:
>100_bases TGTGTTACCCTAATCTCATTCATTGATTTTTATCATTGGTTGGCTATATTTAGGCGGTATAATACACCAAACTCAAATTG CGTAGAAGTTCAATAAAACA
Downstream 100 bases:
>100_bases ATTTTGAGAATATTATCCATTATCCGCATTGTTGGCATTCTTGTGATGTGTTTTTCCCTCACCATGTTAGCACCTGCTTT TGTGGCATTACTCTATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MIEYKIPKSAVIFEEEIKKSRFITYLQHVENLTQAKAFWQQIKSQHPQARHHCWATIAGAPNDSQQFGFSDDGEPAGTAG KPMLSALQGSKIGEICAVVVRYYGGILLGTGGLVRAYGNGVQQALTLLETVVKVQRQSYKVHCDYSHINALQLLCEKQDV MIINQHFVDRVAFELGIRDDKLTAFEQALIERFSGQLQLERE
Sequences:
>Translated_202_residues MIEYKIPKSAVIFEEEIKKSRFITYLQHVENLTQAKAFWQQIKSQHPQARHHCWATIAGAPNDSQQFGFSDDGEPAGTAG KPMLSALQGSKIGEICAVVVRYYGGILLGTGGLVRAYGNGVQQALTLLETVVKVQRQSYKVHCDYSHINALQLLCEKQDV MIINQHFVDRVAFELGIRDDKLTAFEQALIERFSGQLQLERE >Mature_202_residues MIEYKIPKSAVIFEEEIKKSRFITYLQHVENLTQAKAFWQQIKSQHPQARHHCWATIAGAPNDSQQFGFSDDGEPAGTAG KPMLSALQGSKIGEICAVVVRYYGGILLGTGGLVRAYGNGVQQALTLLETVVKVQRQSYKVHCDYSHINALQLLCEKQDV MIINQHFVDRVAFELGIRDDKLTAFEQALIERFSGQLQLERE
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=199, Percent_Identity=52.2613065326633, Blast_Score=182, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22709; Mature: 22709
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEYKIPKSAVIFEEEIKKSRFITYLQHVENLTQAKAFWQQIKSQHPQARHHCWATIAGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCC PNDSQQFGFSDDGEPAGTAGKPMLSALQGSKIGEICAVVVRYYGGILLGTGGLVRAYGNG CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCHHHHHCCC VQQALTLLETVVKVQRQSYKVHCDYSHINALQLLCEKQDVMIINQHFVDRVAFELGIRDD HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCC KLTAFEQALIERFSGQLQLERE HHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MIEYKIPKSAVIFEEEIKKSRFITYLQHVENLTQAKAFWQQIKSQHPQARHHCWATIAGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCC PNDSQQFGFSDDGEPAGTAGKPMLSALQGSKIGEICAVVVRYYGGILLGTGGLVRAYGNG CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCHHHHHCCC VQQALTLLETVVKVQRQSYKVHCDYSHINALQLLCEKQDVMIINQHFVDRVAFELGIRDD HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCC KLTAFEQALIERFSGQLQLERE HHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]