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The map label for this gene is yhdE [C]

Identifier: 15603133

GI number: 15603133

Start: 1461400

End: 1462002

Strand: Direct

Name: yhdE [C]

Synonym: PM1268

Alternate gene names: 15603133

Gene position: 1461400-1462002 (Clockwise)

Preceding gene: 15603122

Following gene: 15603134

Centisome position: 64.74

GC content: 44.94

Gene sequence:

>603_bases
ATGACAGATTTTCAATTTTATCTTGCCTCTAACAGCCCACGCCGAGCGCAAATTTTACAACAGTTAGGTTTTCGTTTTGC
TCTGTGTTGTTGCGAGATTGATGAAACCCCGTTGCCTGATGAAAAAGGTGCTGATTATGTATTGCGTATGGCAATCGAGA
AAAACAACGCTGCACGCCAACAGTGGCAACAGGCAAAATTTTCGCAAAATAGACCGCACTTGCCTTTCCTTTCCGCCGAC
ACATCGGTGATTTTAGAGGATAAAATTTTAGGTAAACCTAAAAATGAAGCTGACGCGAGAGCGATGTTGCGAGCCTTATC
GGCGAGAACACATCAAGTGATCACAGCAGTATGTGTGGCAGATGAAAACCAAATGCAAACGGTGATACAAACGAGCCACG
TGCGTTTTAAAGTGCTGACGGAAAAGGAAATTCAAGGCTACATCGCCACTGGTGAGCCGATGGATAAAGCTGGTGCTTAT
GGTATTCAACAACTTGGTGGCGTTTTTGTTGAACACATTGAGGGCAGTTTTAGCGGGGTGATGGGGTTGCCGGTGTGTGA
AACGGTGGCATTGTTGAAAGCCTTTGGGGTAGAATTGTTTTAA

Upstream 100 bases:

>100_bases
GACCATTTTTTGAAGAAAGTTAATTAGCGTTTAAAGTATAAAGGAATCTGGTGGATTTATCCTAACAGGTTATAATCTTT
TTTATTTAGTCGGTGATCTT

Downstream 100 bases:

>100_bases
TTTCATTGAGGAACACCATGAGCGAACGCCTTTTTCAACACAAAAAACAACAAGAACATTGCCCTCGTTGCGATGCTGTA
TTACAGCTGAAGCAAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTDFQFYLASNSPRRAQILQQLGFRFALCCCEIDETPLPDEKGADYVLRMAIEKNNAARQQWQQAKFSQNRPHLPFLSAD
TSVILEDKILGKPKNEADARAMLRALSARTHQVITAVCVADENQMQTVIQTSHVRFKVLTEKEIQGYIATGEPMDKAGAY
GIQQLGGVFVEHIEGSFSGVMGLPVCETVALLKAFGVELF

Sequences:

>Translated_200_residues
MTDFQFYLASNSPRRAQILQQLGFRFALCCCEIDETPLPDEKGADYVLRMAIEKNNAARQQWQQAKFSQNRPHLPFLSAD
TSVILEDKILGKPKNEADARAMLRALSARTHQVITAVCVADENQMQTVIQTSHVRFKVLTEKEIQGYIATGEPMDKAGAY
GIQQLGGVFVEHIEGSFSGVMGLPVCETVALLKAFGVELF
>Mature_199_residues
TDFQFYLASNSPRRAQILQQLGFRFALCCCEIDETPLPDEKGADYVLRMAIEKNNAARQQWQQAKFSQNRPHLPFLSADT
SVILEDKILGKPKNEADARAMLRALSARTHQVITAVCVADENQMQTVIQTSHVRFKVLTEKEIQGYIATGEPMDKAGAYG
IQQLGGVFVEHIEGSFSGVMGLPVCETVALLKAFGVELF

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=186, Percent_Identity=36.0215053763441, Blast_Score=104, Evalue=4e-23,
Organism=Homo sapiens, GI291045183, Length=186, Percent_Identity=35.4838709677419, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI291045181, Length=117, Percent_Identity=41.8803418803419, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI310133124, Length=117, Percent_Identity=41.8803418803419, Blast_Score=91, Evalue=5e-19,
Organism=Escherichia coli, GI1789646, Length=190, Percent_Identity=46.3157894736842, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI87081830, Length=195, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193202443, Length=188, Percent_Identity=30.8510638297872, Blast_Score=96, Evalue=9e-21,
Organism=Drosophila melanogaster, GI78706856, Length=187, Percent_Identity=36.3636363636364, Blast_Score=120, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1268_PASMU (Q9CLG6)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246205.1
- ProteinModelPortal:   Q9CLG6
- SMR:   Q9CLG6
- GeneID:   1244615
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1268
- NMPDR:   fig|272843.1.peg.1268
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- ProtClustDB:   CLSK870426
- BioCyc:   PMUL272843:PM1268-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 22225; Mature: 22094

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: ACT_SITE 35-35

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFQFYLASNSPRRAQILQQLGFRFALCCCEIDETPLPDEKGADYVLRMAIEKNNAARQ
CCCEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEHHCCCHHHH
QWQQAKFSQNRPHLPFLSADTSVILEDKILGKPKNEADARAMLRALSARTHQVITAVCVA
HHHHHHHCCCCCCCCEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DENQMQTVIQTSHVRFKVLTEKEIQGYIATGEPMDKAGAYGIQQLGGVFVEHIEGSFSGV
CCHHHHHHHHHCCEEEEEEEHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
MGLPVCETVALLKAFGVELF
CCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDFQFYLASNSPRRAQILQQLGFRFALCCCEIDETPLPDEKGADYVLRMAIEKNNAARQ
CCEEEEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEHHCCCHHHH
QWQQAKFSQNRPHLPFLSADTSVILEDKILGKPKNEADARAMLRALSARTHQVITAVCVA
HHHHHHHCCCCCCCCEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DENQMQTVIQTSHVRFKVLTEKEIQGYIATGEPMDKAGAYGIQQLGGVFVEHIEGSFSGV
CCHHHHHHHHHCCEEEEEEEHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
MGLPVCETVALLKAFGVELF
CCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100