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The map label for this gene is yiaN [C]

Identifier: 15603118

GI number: 15603118

Start: 1447079

End: 1448359

Strand: Reverse

Name: yiaN [C]

Synonym: PM1253

Alternate gene names: 15603118

Gene position: 1448359-1447079 (Counterclockwise)

Preceding gene: 15603119

Following gene: 15603117

Centisome position: 64.16

GC content: 44.26

Gene sequence:

>1281_bases
ATGACCGTCGTTATTTTCCTTTCCGTCTTATTAGGTGCCATTTTATTAGGTATTCCCGTTGCGTTTGCCCTATTATTGTG
CGGTGTCGCATTAATGTTACATTTAGATTTATTTGATGCGCAAATTCTTGCTCAACAGCTCGTCAGTGGTGCAGACAGTT
TCTCGTTAATGGCGATTCCTTTTTTCATTTTAGCCGGTGAAATTATGAATGAAGGGGGCTTATCAAAACGGATCATCGAT
CTGCCAATGAAATTGGTCGGACACAAACGGGGTGGCTTAGGCTTTGTTGCCATCCTTGCGGCAATGATCATGGCAAGTTT
ATCCGGTTCCGCCGTCGCAGATACGGCAGCGGTTGCAGCGATGTTACTGCCAATGATGAAAACCACGGGTTATCCGCTTG
ATCGCTCCGCAGGATTAATTGGGACAGCGGGCATCATTGCCCCGATCATTCCGCCTTCGATTCCGTTTATTATTTTCGGT
GTTGCCAGCGGTGTGTCTATTACCAAGTTATTCTTAGCAGGTATCGCACCGGGCATTCTCATGGGGATTTGTTTAGGGGC
GCTTTGGTGGTGGCAAGCGAAACGCTTAAATCTGATGACCTTTTCAAAAGCCACAAAAGAAGAACTGTGTATTTCCTTTA
AAAATAGTATTTGGGCGTTGCTACTACCCGTCATTATCATTGGCGGATTCCGCTCCGGGATTTTCACGCCGACGGAAGCA
GGGGCTGTCGCTGCATTTTATGCGCTAGTCGTGTCCTTATTTATCTATAAAGAGTTGAAATTCAGACAATTATATCGAGT
CATTCTCGCTGCTGGGAAAACCACTGCCGTGGTCATGTTCTTGGTTGCGGCTGCGCAGGTCACAGGTTGGCTCATCACTA
TTGCGGAATTACCGCAAATGATGACGGAATTACTTGAACCATTAATTGACACGCCAACCCTATTATTAATCGTGATTATG
ATCTCTGTCTTCGTCATCGGCATGGTGATGGATTTAACACCTACCGTATTGATTTTGACGCCTGTGTTGATGCCATTAGT
CGAAGAAGCCGGCATCGACCCTGTTTATTTTGGTGTGCTCTTTATTTTGAATACGTCAATTGGGCTTATTACACCACCTG
TCGGCAATGTATTAAATGTCATCACCGGTGTATCTAAGTTACCTTTTGATCAAGCGGCTAAAGGCATACTCCCGTATTTA
TTTATGATGATTATTTTGCTGTTTTCATTCATTTTCTTCCCATCATTGATTTTAACGCCACTTAGCTGGCTACAACCTTA
A

Upstream 100 bases:

>100_bases
TCACCTATTTAGCCAGTTTCATTGCAGGCTGTGCTATTGCGCTACTACTTGTCATCCGACTTTTTTCCAATGCCAATAGA
TTGATTAAAGGAGAACAACA

Downstream 100 bases:

>100_bases
ACTTTAACAGGAGAATATTATGAAACGCTTCAATCTTAAAATGCTCGCAGCTTTAGTGGCCGGTATGGCAGTATTCACCG
CGTCAGCAAATGCCGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTVVIFLSVLLGAILLGIPVAFALLLCGVALMLHLDLFDAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIID
LPMKLVGHKRGGLGFVAILAAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPLDRSAGLIGTAGIIAPIIPPSIPFIIFG
VASGVSITKLFLAGIAPGILMGICLGALWWWQAKRLNLMTFSKATKEELCISFKNSIWALLLPVIIIGGFRSGIFTPTEA
GAVAAFYALVVSLFIYKELKFRQLYRVILAAGKTTAVVMFLVAAAQVTGWLITIAELPQMMTELLEPLIDTPTLLLIVIM
ISVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGILPYL
FMMIILLFSFIFFPSLILTPLSWLQP

Sequences:

>Translated_426_residues
MTVVIFLSVLLGAILLGIPVAFALLLCGVALMLHLDLFDAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIID
LPMKLVGHKRGGLGFVAILAAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPLDRSAGLIGTAGIIAPIIPPSIPFIIFG
VASGVSITKLFLAGIAPGILMGICLGALWWWQAKRLNLMTFSKATKEELCISFKNSIWALLLPVIIIGGFRSGIFTPTEA
GAVAAFYALVVSLFIYKELKFRQLYRVILAAGKTTAVVMFLVAAAQVTGWLITIAELPQMMTELLEPLIDTPTLLLIVIM
ISVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGILPYL
FMMIILLFSFIFFPSLILTPLSWLQP
>Mature_425_residues
TVVIFLSVLLGAILLGIPVAFALLLCGVALMLHLDLFDAQILAQQLVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDL
PMKLVGHKRGGLGFVAILAAMIMASLSGSAVADTAAVAAMLLPMMKTTGYPLDRSAGLIGTAGIIAPIIPPSIPFIIFGV
ASGVSITKLFLAGIAPGILMGICLGALWWWQAKRLNLMTFSKATKEELCISFKNSIWALLLPVIIIGGFRSGIFTPTEAG
AVAAFYALVVSLFIYKELKFRQLYRVILAAGKTTAVVMFLVAAAQVTGWLITIAELPQMMTELLEPLIDTPTLLLIVIMI
SVFVIGMVMDLTPTVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQAAKGILPYLF
MMIILLFSFIFFPSLILTPLSWLQP

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=425, Percent_Identity=69.8823529411765, Blast_Score=544, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45526; Mature: 45395

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCC
>Mature Secondary Structure 
TVVIFLSVLLGAILLGIPVAFALLLCGVALMLHLDLFDAQILAQQLVSGADSFSLMAIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH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HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]