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The map label for this gene is yiaM [C]

Identifier: 15603119

GI number: 15603119

Start: 1448356

End: 1448838

Strand: Reverse

Name: yiaM [C]

Synonym: PM1254

Alternate gene names: 15603119

Gene position: 1448838-1448356 (Counterclockwise)

Preceding gene: 15603120

Following gene: 15603118

Centisome position: 64.18

GC content: 38.92

Gene sequence:

>483_bases
ATGAAATCACTCAGTATATACGTCACCAAACTCTTAGAAAGCCTAGTGGTCGTTATTTTAGCCACCATGTCTTGCCTTGT
CTTTCTCAATGTTGTGTTGCGCTATGGCTTCAATAGCAGTATTAACATTACCGAAGAAGTGTCCCGTTATTTATTTGTCT
GGCTAGCTTTTCTTGGCGCTATTTTGGCGTTTAATGAAAATCGTCATGTTAATGTCACGATCTTTACTTCTCGTCTATCT
TTGGCTAAACAAAAAATACTACATTTAGTCACAGATAGTCTCATGTTATTTTGTTGCTGTCTGCTCATTCAAGGTAGTTG
GGTCCAGTTCCAATTAAATCTCAATAATATGGCGCCTATCTCAGGGATACCGATGGGCATCACCTATTTAGCCAGTTTCA
TTGCAGGCTGTGCTATTGCGCTACTACTTGTCATCCGACTTTTTTCCAATGCCAATAGATTGATTAAAGGAGAACAACAA
TGA

Upstream 100 bases:

>100_bases
TTCCAAGTGATGTACACCGCCCGGCTTGTATTGATGGTCATTCCACGTCGATCCGTAAAGTTGTGGTGAAAATTGCGGTC
AGTGAATTAGAGGTGTCACC

Downstream 100 bases:

>100_bases
CCGTCGTTATTTTCCTTTCCGTCTTATTAGGTGCCATTTTATTAGGTATTCCCGTTGCGTTTGCCCTATTATTGTGCGGT
GTCGCATTAATGTTACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKSLSIYVTKLLESLVVVILATMSCLVFLNVVLRYGFNSSINITEEVSRYLFVWLAFLGAILAFNENRHVNVTIFTSRLS
LAKQKILHLVTDSLMLFCCCLLIQGSWVQFQLNLNNMAPISGIPMGITYLASFIAGCAIALLLVIRLFSNANRLIKGEQQ

Sequences:

>Translated_160_residues
MKSLSIYVTKLLESLVVVILATMSCLVFLNVVLRYGFNSSINITEEVSRYLFVWLAFLGAILAFNENRHVNVTIFTSRLS
LAKQKILHLVTDSLMLFCCCLLIQGSWVQFQLNLNNMAPISGIPMGITYLASFIAGCAIALLLVIRLFSNANRLIKGEQQ
>Mature_160_residues
MKSLSIYVTKLLESLVVVILATMSCLVFLNVVLRYGFNSSINITEEVSRYLFVWLAFLGAILAFNENRHVNVTIFTSRLS
LAKQKILHLVTDSLMLFCCCLLIQGSWVQFQLNLNNMAPISGIPMGITYLASFIAGCAIALLLVIRLFSNANRLIKGEQQ

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

Organism=Escherichia coli, GI1790002, Length=153, Percent_Identity=42.483660130719, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 17880; Mature: 17880

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSIYVTKLLESLVVVILATMSCLVFLNVVLRYGFNSSINITEEVSRYLFVWLAFLGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ILAFNENRHVNVTIFTSRLSLAKQKILHLVTDSLMLFCCCLLIQGSWVQFQLNLNNMAPI
HHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
SGIPMGITYLASFIAGCAIALLLVIRLFSNANRLIKGEQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MKSLSIYVTKLLESLVVVILATMSCLVFLNVVLRYGFNSSINITEEVSRYLFVWLAFLGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ILAFNENRHVNVTIFTSRLSLAKQKILHLVTDSLMLFCCCLLIQGSWVQFQLNLNNMAPI
HHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
SGIPMGITYLASFIAGCAIALLLVIRLFSNANRLIKGEQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]