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The map label for this gene is yiaO [C]

Identifier: 15603117

GI number: 15603117

Start: 1446073

End: 1447059

Strand: Reverse

Name: yiaO [C]

Synonym: PM1252

Alternate gene names: 15603117

Gene position: 1447059-1446073 (Counterclockwise)

Preceding gene: 15603118

Following gene: 15603116

Centisome position: 64.1

GC content: 41.24

Gene sequence:

>987_bases
ATGAAACGCTTCAATCTTAAAATGCTCGCAGCTTTAGTGGCCGGTATGGCAGTATTCACCGCGTCAGCAAATGCCGCAAC
CACATTACGCTTTGGTTACGAGGCACCGCGTAGTGATACGCAACATGAAGCTGCAAAGAAATTCAATGAGCTTCTCAAAG
AAAAAACCAAAGGCGAAATTAAACTCAGTCTTTTCCCTGACAGTACGTTAGGCAATGCACAAACTATGATCAGTGCGGTA
CGCGGTGGCACAATTGATTTAGAAATGTCAGGTTCACCAAACTTTTCAGGTTTAGTGCCTAAATTAAATGTGATTGATAT
CCCGTTTATTTTCCAAAATCGTGAGCATGCTTATGCCGTGTTAGACGGCGAAATTGGACAAGGCTTATTAAAAGAATTAG
AAGCACAAGGCTTAAAAGGGTTAGCCTTCTGGGAAGTGGGTTTCCGTTCATTTACTAACTCAAAACATCCCGTGAAAACG
CCAGATGACATTAAAGGATTGAAGGTACGTACTAATCAAAACCCAATGTATATTCAAGCGTTCTCTATCTTAGGGGCAAA
CCCTGTGCCAATGCCGCTTTCAGAGCTTTATACTGCGTTAGAAACACGTGCTGTTGATGCTCAAGAACACCCTGTCGGTA
TTGTTTGGTCTGCTAAATTGTATGAAGTACAAAAACACTTAAGCTTAACCAATCATGGATATACCCCACTTATCGTGGTG
ATGAATAAAGCCAAATTTGATGGGTTGTCACCAGCACTACAAAGCGCTATTCTTGAAGCCGCGAAAGAAGCCGGCGCCTA
TCAACGAAAACTCAATTTGGATAATGAAAAAGGCATTATTGAAAAAATGCAAAAAGCAGGCATCCAAGTGATTGAAACGG
TTGATACCAAACCATTCAAAGCAGCGATCGAAAGTGAAGTACGTAAAGCTTTCATTGAGAAAAATGGTGATGACCTCGTC
AAACAAATTGATGCGCTTGCTAAATAA

Upstream 100 bases:

>100_bases
TTTATGATGATTATTTTGCTGTTTTCATTCATTTTCTTCCCATCATTGATTTTAACGCCACTTAGCTGGCTACAACCTTA
AACTTTAACAGGAGAATATT

Downstream 100 bases:

>100_bases
GCGAAATTCGCGGTCGATTTAATATTTCATGCGGATCGACCGCACTTTTGCTCCTTCCTCATACCTCAGGAGGAAACATG
GTGATAACTGAACAATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKRFNLKMLAALVAGMAVFTASANAATTLRFGYEAPRSDTQHEAAKKFNELLKEKTKGEIKLSLFPDSTLGNAQTMISAV
RGGTIDLEMSGSPNFSGLVPKLNVIDIPFIFQNREHAYAVLDGEIGQGLLKELEAQGLKGLAFWEVGFRSFTNSKHPVKT
PDDIKGLKVRTNQNPMYIQAFSILGANPVPMPLSELYTALETRAVDAQEHPVGIVWSAKLYEVQKHLSLTNHGYTPLIVV
MNKAKFDGLSPALQSAILEAAKEAGAYQRKLNLDNEKGIIEKMQKAGIQVIETVDTKPFKAAIESEVRKAFIEKNGDDLV
KQIDALAK

Sequences:

>Translated_328_residues
MKRFNLKMLAALVAGMAVFTASANAATTLRFGYEAPRSDTQHEAAKKFNELLKEKTKGEIKLSLFPDSTLGNAQTMISAV
RGGTIDLEMSGSPNFSGLVPKLNVIDIPFIFQNREHAYAVLDGEIGQGLLKELEAQGLKGLAFWEVGFRSFTNSKHPVKT
PDDIKGLKVRTNQNPMYIQAFSILGANPVPMPLSELYTALETRAVDAQEHPVGIVWSAKLYEVQKHLSLTNHGYTPLIVV
MNKAKFDGLSPALQSAILEAAKEAGAYQRKLNLDNEKGIIEKMQKAGIQVIETVDTKPFKAAIESEVRKAFIEKNGDDLV
KQIDALAK
>Mature_328_residues
MKRFNLKMLAALVAGMAVFTASANAATTLRFGYEAPRSDTQHEAAKKFNELLKEKTKGEIKLSLFPDSTLGNAQTMISAV
RGGTIDLEMSGSPNFSGLVPKLNVIDIPFIFQNREHAYAVLDGEIGQGLLKELEAQGLKGLAFWEVGFRSFTNSKHPVKT
PDDIKGLKVRTNQNPMYIQAFSILGANPVPMPLSELYTALETRAVDAQEHPVGIVWSAKLYEVQKHLSLTNHGYTPLIVV
MNKAKFDGLSPALQSAILEAAKEAGAYQRKLNLDNEKGIIEKMQKAGIQVIETVDTKPFKAAIESEVRKAFIEKNGDDLV
KQIDALAK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=317, Percent_Identity=58.6750788643533, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35972; Mature: 35972

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFNLKMLAALVAGMAVFTASANAATTLRFGYEAPRSDTQHEAAKKFNELLKEKTKGEI
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCE
KLSLFPDSTLGNAQTMISAVRGGTIDLEMSGSPNFSGLVPKLNVIDIPFIFQNREHAYAV
EEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCEEEECCCCEEEE
LDGEIGQGLLKELEAQGLKGLAFWEVGFRSFTNSKHPVKTPDDIKGLKVRTNQNPMYIQA
ECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEE
FSILGANPVPMPLSELYTALETRAVDAQEHPVGIVWSAKLYEVQKHLSLTNHGYTPLIVV
EEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEE
MNKAKFDGLSPALQSAILEAAKEAGAYQRKLNLDNEKGIIEKMQKAGIQVIETVDTKPFK
EECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCHHH
AAIESEVRKAFIEKNGDDLVKQIDALAK
HHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKRFNLKMLAALVAGMAVFTASANAATTLRFGYEAPRSDTQHEAAKKFNELLKEKTKGEI
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCE
KLSLFPDSTLGNAQTMISAVRGGTIDLEMSGSPNFSGLVPKLNVIDIPFIFQNREHAYAV
EEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCEEEECCCCEEEE
LDGEIGQGLLKELEAQGLKGLAFWEVGFRSFTNSKHPVKTPDDIKGLKVRTNQNPMYIQA
ECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEE
FSILGANPVPMPLSELYTALETRAVDAQEHPVGIVWSAKLYEVQKHLSLTNHGYTPLIVV
EEHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEE
MNKAKFDGLSPALQSAILEAAKEAGAYQRKLNLDNEKGIIEKMQKAGIQVIETVDTKPFK
EECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCHHH
AAIESEVRKAFIEKNGDDLVKQIDALAK
HHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]