| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is hisA
Identifier: 15603068
GI number: 15603068
Start: 1396909
End: 1397658
Strand: Direct
Name: hisA
Synonym: PM1203
Alternate gene names: 15603068
Gene position: 1396909-1397658 (Clockwise)
Preceding gene: 15603067
Following gene: 15603069
Centisome position: 61.88
GC content: 45.33
Gene sequence:
>750_bases ATGAAAACATCACAAATTATCCCCGCTCTTGATCTGATTGATGGTCAAGTGGTGCGCCTTTATCAAGGTGATTATGGACA GAAAACCCTTTATTCCGATAACCCGATAGCTCAATTCCAAGATTATGTGGCACAAGGGGCAAAGTACTTACATTTAGTGG ATCTGACTGGCGCGAAAGATCCAACTAAACGCCAAACGCAACTCATTGGTGAAATCATCAACGCAGTAAATTGCTCAATT CAAGTGGGTGGCGGTATTCGTACTGAGCAAGATGTGGCAGATTTACTGGCGGTGGGCGCAAATCGTGTAGTGATTGGCTC AACAGCAGTCAAGCAACCCGAAATGGTCAAACAATGGTTTAAAAAATACGGGGCAGAAAAATTTGTCTTAGCGTTAGATG TCAACATTAACGCACAAGGCGAAAAACAGATCGCAGTGAGCGGTTGGCAAGAAAACAGCGGCGTGTCTTTAGAAGCCTTA ATTGCCGATTTCCGTGAAGTCGGTTTGCAACACGTGTTATGTACCGATATTTCTAAAGATGGTACCCTGCAAGGTTCTAA TGTAGCGCTATATCAAGAAATCTGTACCCAATTCCCGACGATTCAATTCCAATCATCAGGCGGGATCGGTTCCATCGCGG ATATTGACGCCTTAAAAGGCACGGGGGTCGCTGGTGTGATTGTGGGGCGTGCTTTATTGGAAGGTAAGTTTAACGTGCAG GAGGCGATCGCATGTTGGCAAAACGCATAA
Upstream 100 bases:
>100_bases TTCTGGCAAGGCAGGCGCGTTATTTTTGCGTAATTTTGTGGAAAACATTAAATAAAGTGCGGTCGATTTTTTAAAAATTT TGCAAACACAGGACAACACA
Downstream 100 bases:
>100_bases TTCCTTGCTTAGACGTACGTGATGGGCAGGTGGTCAAAGGTGTACAATTTCGCAATCACGAGATTATTGGCGATATTGTG CCGCTGGCGCAACGCTATGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKTSQIIPALDLIDGQVVRLYQGDYGQKTLYSDNPIAQFQDYVAQGAKYLHLVDLTGAKDPTKRQTQLIGEIINAVNCSI QVGGGIRTEQDVADLLAVGANRVVIGSTAVKQPEMVKQWFKKYGAEKFVLALDVNINAQGEKQIAVSGWQENSGVSLEAL IADFREVGLQHVLCTDISKDGTLQGSNVALYQEICTQFPTIQFQSSGGIGSIADIDALKGTGVAGVIVGRALLEGKFNVQ EAIACWQNA
Sequences:
>Translated_249_residues MKTSQIIPALDLIDGQVVRLYQGDYGQKTLYSDNPIAQFQDYVAQGAKYLHLVDLTGAKDPTKRQTQLIGEIINAVNCSI QVGGGIRTEQDVADLLAVGANRVVIGSTAVKQPEMVKQWFKKYGAEKFVLALDVNINAQGEKQIAVSGWQENSGVSLEAL IADFREVGLQHVLCTDISKDGTLQGSNVALYQEICTQFPTIQFQSSGGIGSIADIDALKGTGVAGVIVGRALLEGKFNVQ EAIACWQNA >Mature_249_residues MKTSQIIPALDLIDGQVVRLYQGDYGQKTLYSDNPIAQFQDYVAQGAKYLHLVDLTGAKDPTKRQTQLIGEIINAVNCSI QVGGGIRTEQDVADLLAVGANRVVIGSTAVKQPEMVKQWFKKYGAEKFVLALDVNINAQGEKQIAVSGWQENSGVSLEAL IADFREVGLQHVLCTDISKDGTLQGSNVALYQEICTQFPTIQFQSSGGIGSIADIDALKGTGVAGVIVGRALLEGKFNVQ EAIACWQNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=244, Percent_Identity=67.6229508196721, Blast_Score=349, Evalue=8e-98, Organism=Escherichia coli, GI1788336, Length=257, Percent_Identity=23.3463035019455, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_PASMU (Q9CLM1)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246140.1 - ProteinModelPortal: Q9CLM1 - SMR: Q9CLM1 - GeneID: 1244550 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1203 - NMPDR: fig|272843.1.peg.1203 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: PMUL272843:PM1203-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26759; Mature: 26759
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: ACT_SITE 11-11 ACT_SITE 133-133
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSQIIPALDLIDGQVVRLYQGDYGQKTLYSDNPIAQFQDYVAQGAKYLHLVDLTGAKD CCCCCCCCHHHHCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCCC PTKRQTQLIGEIINAVNCSIQVGGGIRTEQDVADLLAVGANRVVIGSTAVKQPEMVKQWF CHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH KKYGAEKFVLALDVNINAQGEKQIAVSGWQENSGVSLEALIADFREVGLQHVLCTDISKD HHCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GTLQGSNVALYQEICTQFPTIQFQSSGGIGSIADIDALKGTGVAGVIVGRALLEGKFNVQ CCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHH EAIACWQNA HHHHHHCCC >Mature Secondary Structure MKTSQIIPALDLIDGQVVRLYQGDYGQKTLYSDNPIAQFQDYVAQGAKYLHLVDLTGAKD CCCCCCCCHHHHCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCCC PTKRQTQLIGEIINAVNCSIQVGGGIRTEQDVADLLAVGANRVVIGSTAVKQPEMVKQWF CHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH KKYGAEKFVLALDVNINAQGEKQIAVSGWQENSGVSLEALIADFREVGLQHVLCTDISKD HHCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GTLQGSNVALYQEICTQFPTIQFQSSGGIGSIADIDALKGTGVAGVIVGRALLEGKFNVQ CCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHH EAIACWQNA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100