| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603066
Identifier: 15603066
GI number: 15603066
Start: 1395602
End: 1396264
Strand: Direct
Name: 15603066
Synonym: PM1201
Alternate gene names: NA
Gene position: 1395602-1396264 (Clockwise)
Preceding gene: 15603065
Following gene: 15603067
Centisome position: 61.82
GC content: 26.85
Gene sequence:
>663_bases GTGAGTAAAAAGGATGGGTATTTAGAGTTTTTTTCTTATTTTAATATTAGTGAAGAAAAATTTATTAATTTTGCTAAGGA AAGCATTATTTTTATCAAACAAGAAAAAGCCAAACAGGAATGGGATATTCTCAAGTCAAAAATATTAAATGAAAAAGAAA ATGTGTATGTAAGAAATTTTGGTAGAAATGGCCAAGGAGGACATTTATATCAAGAGGTTTATAAGCAATTATTTTTAGCT AATATAATTGTAGATCCTTCAAATAATAACTATCCAACAAAGCTCTTAGAAAAATCAGTTGGGTTAGTAAAAAATAAAAA TTTATATAATTACCAGGTATCCCATATCTTTGGTCTGACGAAAAATCCATATGCATTTTGTGCTCCTTGGAATATAGTAT TTATCCCTAAAATTCTAGACCCTTTTACAGGTCATGAAAGTAAAGGAGAAATAACGGAAAAAATAACAGCGATGTATCGT AGATTAATGTGGGATAAATATGAAGATCTAATCAGTGACTATAATAAGATTATGGAAAAATATAGAGAAGTAATAAAATC AGAAATAGAAAAATATAAAGCTCTATCCAAACGGAAGAATGATATTTATTCTAGGTTTATTGAGTCAGTTAATATTGAAT TTAATGTGATAGAAAAGATCTAA
Upstream 100 bases:
>100_bases ACCACCACAAAATCGAAAGCCTGTTTAAAGTGTTTGGGCGTACGTTAAGACAGTGTATTAAGGTTGAAGGGAATGAGTTG CCGAGTAGTAAGGGGGTTTT
Downstream 100 bases:
>100_bases ATATGCAAAATATAACTATAATCAACACCCGTTGCGCGAACCTTTCTTCCGTCAAATTTGCTTTTGACCGTTTAGGTTAC CACACAGAAATTACCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSKKDGYLEFFSYFNISEEKFINFAKESIIFIKQEKAKQEWDILKSKILNEKENVYVRNFGRNGQGGHLYQEVYKQLFLA NIIVDPSNNNYPTKLLEKSVGLVKNKNLYNYQVSHIFGLTKNPYAFCAPWNIVFIPKILDPFTGHESKGEITEKITAMYR RLMWDKYEDLISDYNKIMEKYREVIKSEIEKYKALSKRKNDIYSRFIESVNIEFNVIEKI
Sequences:
>Translated_220_residues MSKKDGYLEFFSYFNISEEKFINFAKESIIFIKQEKAKQEWDILKSKILNEKENVYVRNFGRNGQGGHLYQEVYKQLFLA NIIVDPSNNNYPTKLLEKSVGLVKNKNLYNYQVSHIFGLTKNPYAFCAPWNIVFIPKILDPFTGHESKGEITEKITAMYR RLMWDKYEDLISDYNKIMEKYREVIKSEIEKYKALSKRKNDIYSRFIESVNIEFNVIEKI >Mature_219_residues SKKDGYLEFFSYFNISEEKFINFAKESIIFIKQEKAKQEWDILKSKILNEKENVYVRNFGRNGQGGHLYQEVYKQLFLAN IIVDPSNNNYPTKLLEKSVGLVKNKNLYNYQVSHIFGLTKNPYAFCAPWNIVFIPKILDPFTGHESKGEITEKITAMYRR LMWDKYEDLISDYNKIMEKYREVIKSEIEKYKALSKRKNDIYSRFIESVNIEFNVIEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1201_PASMU (Q9CLM2)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246138.1 - GeneID: 1244548 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1201 - NMPDR: fig|272843.1.peg.1201 - BioCyc: PMUL272843:PM1201-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26197; Mature: 26066
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKDGYLEFFSYFNISEEKFINFAKESIIFIKQEKAKQEWDILKSKILNEKENVYVRNF CCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEC GRNGQGGHLYQEVYKQLFLANIIVDPSNNNYPTKLLEKSVGLVKNKNLYNYQVSHIFGLT CCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCC KNPYAFCAPWNIVFIPKILDPFTGHESKGEITEKITAMYRRLMWDKYEDLISDYNKIMEK CCCEEEECCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YREVIKSEIEKYKALSKRKNDIYSRFIESVNIEFNVIEKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure SKKDGYLEFFSYFNISEEKFINFAKESIIFIKQEKAKQEWDILKSKILNEKENVYVRNF CCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEC GRNGQGGHLYQEVYKQLFLANIIVDPSNNNYPTKLLEKSVGLVKNKNLYNYQVSHIFGLT CCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHCCCC KNPYAFCAPWNIVFIPKILDPFTGHESKGEITEKITAMYRRLMWDKYEDLISDYNKIMEK CCCEEEECCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YREVIKSEIEKYKALSKRKNDIYSRFIESVNIEFNVIEKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100