| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is afuA_3
Identifier: 15602820
GI number: 15602820
Start: 1126339
End: 1127373
Strand: Direct
Name: afuA_3
Synonym: PM0955
Alternate gene names: NA
Gene position: 1126339-1127373 (Clockwise)
Preceding gene: 15602819
Following gene: 15602821
Centisome position: 49.89
GC content: 41.93
Gene sequence:
>1035_bases ATGAAAACATTAAAAATCTCTGCCATTTCCACCGCACTTTTACTCAGTGGCGGATTGCTCTCCTCTCTCGCTTTCGCAGA AGGGCGATTAACTGTTTATTGCAGTGCACAAAACACGATGTGTGAGCAAGAAGTTGAGGCATTTGGCAAAAAGTATGACG TCAAAGTCAGCCATATTCGTGCGGGAACAGGCAGTATTTTAGCGCGAATAGAGGCAGAAAAAGCCAATCCTCAGGGTGAT GTTTGGTATGGCGGTACGCTAGATCCCCATTCACAAGCTGGAGAAATGGGGCTCCTCTCTGCTTATCAATCACCTAATTT GCAATACATTCCGGATGAACTCAAAGATCCCGCTAAAGTCAAAGGGAATTACACTTCCGCCATTTATTTAGGGGTACTCG GTTTTGGAGTAAACACAGAACGTTTAGCCAAATTGAATATTCCCGTTCCTAAATGTTGGCAAGATTTGACCGATCCACGC TTGAAAAATGAAATCCAAGCCGCCGATCCACAAAGCTCAGGAACAGCCTACACAGCATTAGCGACTTTTATCCAACTTTG GGGGGAAGACAAGGCGTTTCGTTATTTGACGGATTTACATAAAAACGTGTCGCAATATACCAAGTCTGGTAACACGGCGA CACGCAATACTGCGCGAGGAGAAGCGGCTATTGGTATCGGGTTCTTACATGAACACTCTATTGAAAAAGAAAAAGGGGCG CCTGTTGAATTAATCGTCCCTTGTGAAGGAACGGGTTACGAAATTGGCGGGGTCAGTATTATTAAAGGCGCGAGAAACCT CGATAATGCTAAATTATTTGTAGATTGGGCATTATCAAAAGAAGCACAAGAATTATCTTGGCAAAAAGGGGAAACGCACC AGATTTTAACCAATACTCAAGCAAAACAATCACCTTATTCTCTCGACTTTAAATCAATTAATTTAATTAATTATGATTTC GATAAATATGGTGCTGTAGAAGAACGTAAACGTCTGATCAAAAAATGGGTAGATGAAGTCAAACTTGCAAAATAG
Upstream 100 bases:
>100_bases TAATTATGACTTTGATAAATTTGGTTCAAATGAAATGCGTAGTCACCTCATCGGAAAATGGGTTGATAAAATCAAACTCA ATAAATAGTCAGGAGTCAGC
Downstream 100 bases:
>100_bases TTGGTGGAAATACGTTTAATATGATTCACACGTTGTTCAACAAAAAATTTATCATTCTTGATAAGTAAAGAGGATTTTTT ATTTCTTCATTCAATAGGGG
Product: AfuA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKTLKISAISTALLLSGGLLSSLAFAEGRLTVYCSAQNTMCEQEVEAFGKKYDVKVSHIRAGTGSILARIEAEKANPQGD VWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDELKDPAKVKGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPR LKNEIQAADPQSSGTAYTALATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHEHSIEKEKGA PVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQELSWQKGETHQILTNTQAKQSPYSLDFKSINLINYDF DKYGAVEERKRLIKKWVDEVKLAK
Sequences:
>Translated_344_residues MKTLKISAISTALLLSGGLLSSLAFAEGRLTVYCSAQNTMCEQEVEAFGKKYDVKVSHIRAGTGSILARIEAEKANPQGD VWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDELKDPAKVKGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPR LKNEIQAADPQSSGTAYTALATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHEHSIEKEKGA PVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQELSWQKGETHQILTNTQAKQSPYSLDFKSINLINYDF DKYGAVEERKRLIKKWVDEVKLAK >Mature_344_residues MKTLKISAISTALLLSGGLLSSLAFAEGRLTVYCSAQNTMCEQEVEAFGKKYDVKVSHIRAGTGSILARIEAEKANPQGD VWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDELKDPAKVKGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPR LKNEIQAADPQSSGTAYTALATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHEHSIEKEKGA PVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQELSWQKGETHQILTNTQAKQSPYSLDFKSINLINYDF DKYGAVEERKRLIKKWVDEVKLAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37824; Mature: 37824
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKISAISTALLLSGGLLSSLAFAEGRLTVYCSAQNTMCEQEVEAFGKKYDVKVSHIR CCEEEEHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEE AGTGSILARIEAEKANPQGDVWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDELKDPAKV CCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEECCHHHCCCCHH KGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPRLKNEIQAADPQSSGTAYTAL CCCCHHEEEEEHHHCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHH ATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHEHSIEKEKGA HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC PVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQELSWQKGETHQILTNTQ CEEEEEECCCCCEEECCEEEECCCCCCCCCEEEEEEHHCCHHHHHCCCCCCCCEEEECCC AKQSPYSLDFKSINLINYDFDKYGAVEERKRLIKKWVDEVKLAK CCCCCCCCCCEEEEEEEECHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTLKISAISTALLLSGGLLSSLAFAEGRLTVYCSAQNTMCEQEVEAFGKKYDVKVSHIR CCEEEEHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEE AGTGSILARIEAEKANPQGDVWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDELKDPAKV CCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEECCHHHCCCCHH KGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPRLKNEIQAADPQSSGTAYTAL CCCCHHEEEEEHHHCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHH ATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHEHSIEKEKGA HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCC PVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQELSWQKGETHQILTNTQ CEEEEEECCCCCEEECCEEEECCCCCCCCCEEEEEEHHCCHHHHHCCCCCCCCEEEECCC AKQSPYSLDFKSINLINYDFDKYGAVEERKRLIKKWVDEVKLAK CCCCCCCCCCEEEEEEEECHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]