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The map label for this gene is afuB_1 [H]

Identifier: 15602821

GI number: 15602821

Start: 1127520

End: 1129577

Strand: Direct

Name: afuB_1 [H]

Synonym: PM0956

Alternate gene names: 15602821

Gene position: 1127520-1129577 (Clockwise)

Preceding gene: 15602820

Following gene: 15602822

Centisome position: 49.95

GC content: 42.27

Gene sequence:

>2058_bases
ATGGAGCAGAAAAACACTTTCACATTTAGCACACCATTAATTTGGGTGTTATTCGCCTTATTAGGCTTTGCCCTTTTACC
GTCAAAAGCCTTAGATTACGGCTTATGGGACTCTACTAGCGATGAAATGCTTGAAGCTATGGGCTGGTATAATCTCAATT
TGAGTTGGTCTTGGTTTTTAGCCGTGCTCATTTTTCCCGTTTTATCTTTGATTTTTCCAAAAGAAAGTACAAAACGTGCC
AAAATAGAACTTGCTCTGATTGCAGCGATTTTCTTATTTGTCTTTATCTCTGCCACAGTAGCCAAGTTTAGCCTAGGGTA
TTCCGTCATCATTCTCATGGTGGCACTTCTCGCCCTTGCGACAAATGCTTTAGCACAATTAAAAGTCATGCAGGGGGATA
AATTTGTCATCGCCTCGCTCATTGCGATTGTGATGACGATTTTTTTCTTTATCGTTTACCCGACTTTTGCCATTTTACTT
TCCATGTTCTTTGATAATGGTGAGTTTAAACCGCAACAAGTCGCTGAAATTATCCAACAACCTTATGTGATTCGCGTTGT
AGGAAACTCGCTTGCCGTCTCCTCTGTGGTCGGTGTGCTATCCACCATTTTTGGTTTAGCCTTTGCCCTCTATACCACAC
GTATCGCTAAACGTACGGCATTCATTGGTAAGATTTTCTCTATTCTGCCAATTGTTACCCCGCCTTTTGTGGTCGGTTTA
GGGGTTACTTTAATGCTTGGACGCTCAGGGTATGTCACTGCTTTTTTAGTGGAATATTTAGGCTTTAGCAGTAACTGGCT
ATATGGCTTTACTGGTATTGTGATTGCCCATACCTTAGCACTCACCCCTATGTCTTTTATGATCTTGGAAGGTGCCTTAA
AATCGATCCACCCTTCGATTGAAGAGGCGGCTTATACGTTACGCTCAAATCGTTACCAAGCGTTCTTCCATATTATTTTC
CCATTGCTCAAACCTGCATTAGCCAACTCCTTCTTAGTGGTCGTCATCCAATCCCTCGCGGACTTCAGTACTCCACTTGT
CCTTGGCGGAAGCTTTGATGTCATTGCGACTCAAATTTACTTCTATATTGCGGGTTCACAATTAGATTATGCTTCAGCCA
GTACATTAGGTACGATTCTCTTAATGTTCTCACTGGCGATTTTCGTGATTCAATATTTATGGATTGGTAAACGTTCCTAT
GTGACTGTTTCTGGTAAATCGTACCGCGGTGATGTGCAAGAATTGCCAAATGGGCTAAAAGGGATTATCGTCTTTTTCCT
TGGCTTTTGGACGCTATTTAACCTTGTTCTGTACGGCAGTATCTTCTACGGCAGTTTCACCGTGAACTGGGGAGTTGACT
ACACACTCACCTTGAAAAACTATCAAATCCTGTTTGGACAAGGTTTCAGTGACGGTGCATGGCCTTCTTTAATTCAAACC
GTGATTTTTGCTGCCAGTGCAGCGCCAGTGACCGCCTTATTTGGTTTACTGATTGCTTATATTACGGTTCGCCGTGAATT
CAAAGGCAAGAAAACCTTGGAATTTTTAACCTTACTGTGTTTCGCTGTACCCGGTACCGTGGCAGGGGTATCCTATATTA
TTGCCTTCAACAGCTCACCAATTTATCTCACAGGGACAGCGATGATCATTATTTTATCAATGGTCATGCGTAATATGCCT
GTGGGGATGCGTGCTGCTATTGCAGGCTTAGGTCAATTAGACAAATCGCTTGATGAAGCCTCCCTTTCCTTAAAAGGTAG
CTCCTTCAAAACCATTTGGTATATTGTCTTCCCACTCTTAAAACCTGCTTTACTTTCTGCTTTAGTAACCAGTTTCGTCC
GCTCAATGACCACGGTCAGCGCGATTATTTTCTTGGTTACCGCAGATACACGCGTGGCAACCTCCTATATTTTAAACCGT
GTAGAAGATGGTGAATACGGTATTGCAATTGCATATGGTTCAATCCTCATCGTAGTAATGATGGCGATTATCTTATTCTT
TGACTGGATCGTGGGCGATACGCGCATTTCACGTTCTAAAGCGAAAAAAATGAATTAA

Upstream 100 bases:

>100_bases
ATTTATCATTCTTGATAAGTAAAGAGGATTTTTTATTTCTTCATTCAATAGGGGCAAGCCCCCTATTGAATGGTCTATTA
CTGCTTAATTAGAGGTCTTT

Downstream 100 bases:

>100_bases
TTGATAGGTAGTAGAATATGAGTAATAACGATTTCTTAGTGTTAAAAAATGTCACAAAAGCATTTGGTAAAGCCGTAGTG
ATTGATAATTTAGATCTCAG

Product: AfuB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MEQKNTFTFSTPLIWVLFALLGFALLPSKALDYGLWDSTSDEMLEAMGWYNLNLSWSWFLAVLIFPVLSLIFPKESTKRA
KIELALIAAIFLFVFISATVAKFSLGYSVIILMVALLALATNALAQLKVMQGDKFVIASLIAIVMTIFFFIVYPTFAILL
SMFFDNGEFKPQQVAEIIQQPYVIRVVGNSLAVSSVVGVLSTIFGLAFALYTTRIAKRTAFIGKIFSILPIVTPPFVVGL
GVTLMLGRSGYVTAFLVEYLGFSSNWLYGFTGIVIAHTLALTPMSFMILEGALKSIHPSIEEAAYTLRSNRYQAFFHIIF
PLLKPALANSFLVVVIQSLADFSTPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGTILLMFSLAIFVIQYLWIGKRSY
VTVSGKSYRGDVQELPNGLKGIIVFFLGFWTLFNLVLYGSIFYGSFTVNWGVDYTLTLKNYQILFGQGFSDGAWPSLIQT
VIFAASAAPVTALFGLLIAYITVRREFKGKKTLEFLTLLCFAVPGTVAGVSYIIAFNSSPIYLTGTAMIIILSMVMRNMP
VGMRAAIAGLGQLDKSLDEASLSLKGSSFKTIWYIVFPLLKPALLSALVTSFVRSMTTVSAIIFLVTADTRVATSYILNR
VEDGEYGIAIAYGSILIVVMMAIILFFDWIVGDTRISRSKAKKMN

Sequences:

>Translated_685_residues
MEQKNTFTFSTPLIWVLFALLGFALLPSKALDYGLWDSTSDEMLEAMGWYNLNLSWSWFLAVLIFPVLSLIFPKESTKRA
KIELALIAAIFLFVFISATVAKFSLGYSVIILMVALLALATNALAQLKVMQGDKFVIASLIAIVMTIFFFIVYPTFAILL
SMFFDNGEFKPQQVAEIIQQPYVIRVVGNSLAVSSVVGVLSTIFGLAFALYTTRIAKRTAFIGKIFSILPIVTPPFVVGL
GVTLMLGRSGYVTAFLVEYLGFSSNWLYGFTGIVIAHTLALTPMSFMILEGALKSIHPSIEEAAYTLRSNRYQAFFHIIF
PLLKPALANSFLVVVIQSLADFSTPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGTILLMFSLAIFVIQYLWIGKRSY
VTVSGKSYRGDVQELPNGLKGIIVFFLGFWTLFNLVLYGSIFYGSFTVNWGVDYTLTLKNYQILFGQGFSDGAWPSLIQT
VIFAASAAPVTALFGLLIAYITVRREFKGKKTLEFLTLLCFAVPGTVAGVSYIIAFNSSPIYLTGTAMIIILSMVMRNMP
VGMRAAIAGLGQLDKSLDEASLSLKGSSFKTIWYIVFPLLKPALLSALVTSFVRSMTTVSAIIFLVTADTRVATSYILNR
VEDGEYGIAIAYGSILIVVMMAIILFFDWIVGDTRISRSKAKKMN
>Mature_685_residues
MEQKNTFTFSTPLIWVLFALLGFALLPSKALDYGLWDSTSDEMLEAMGWYNLNLSWSWFLAVLIFPVLSLIFPKESTKRA
KIELALIAAIFLFVFISATVAKFSLGYSVIILMVALLALATNALAQLKVMQGDKFVIASLIAIVMTIFFFIVYPTFAILL
SMFFDNGEFKPQQVAEIIQQPYVIRVVGNSLAVSSVVGVLSTIFGLAFALYTTRIAKRTAFIGKIFSILPIVTPPFVVGL
GVTLMLGRSGYVTAFLVEYLGFSSNWLYGFTGIVIAHTLALTPMSFMILEGALKSIHPSIEEAAYTLRSNRYQAFFHIIF
PLLKPALANSFLVVVIQSLADFSTPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGTILLMFSLAIFVIQYLWIGKRSY
VTVSGKSYRGDVQELPNGLKGIIVFFLGFWTLFNLVLYGSIFYGSFTVNWGVDYTLTLKNYQILFGQGFSDGAWPSLIQT
VIFAASAAPVTALFGLLIAYITVRREFKGKKTLEFLTLLCFAVPGTVAGVSYIIAFNSSPIYLTGTAMIIILSMVMRNMP
VGMRAAIAGLGQLDKSLDEASLSLKGSSFKTIWYIVFPLLKPALLSALVTSFVRSMTTVSAIIFLVTADTRVATSYILNR
VEDGEYGIAIAYGSILIVVMMAIILFFDWIVGDTRISRSKAKKMN

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1788764, Length=179, Percent_Identity=29.0502793296089, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 75372; Mature: 75372

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKNTFTFSTPLIWVLFALLGFALLPSKALDYGLWDSTSDEMLEAMGWYNLNLSWSWFL
CCCCCCEEECCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCEECCCCHHHHH
AVLIFPVLSLIFPKESTKRAKIELALIAAIFLFVFISATVAKFSLGYSVIILMVALLALA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNALAQLKVMQGDKFVIASLIAIVMTIFFFIVYPTFAILLSMFFDNGEFKPQQVAEIIQQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
PYVIRVVGNSLAVSSVVGVLSTIFGLAFALYTTRIAKRTAFIGKIFSILPIVTPPFVVGL
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GVTLMLGRSGYVTAFLVEYLGFSSNWLYGFTGIVIAHTLALTPMSFMILEGALKSIHPSI
HHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EEAAYTLRSNRYQAFFHIIFPLLKPALANSFLVVVIQSLADFSTPLVLGGSFDVIATQIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
FYIAGSQLDYASASTLGTILLMFSLAIFVIQYLWIGKRSYVTVSGKSYRGDVQELPNGLK
HEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHH
GIIVFFLGFWTLFNLVLYGSIFYGSFTVNWGVDYTLTLKNYQILFGQGFSDGAWPSLIQT
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECEEEEEECCCCCCCCHHHHHH
VIFAASAAPVTALFGLLIAYITVRREFKGKKTLEFLTLLCFAVPGTVAGVSYIIAFNSSP
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCCC
IYLTGTAMIIILSMVMRNMPVGMRAAIAGLGQLDKSLDEASLSLKGSSFKTIWYIVFPLL
EEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH
KPALLSALVTSFVRSMTTVSAIIFLVTADTRVATSYILNRVEDGEYGIAIAYGSILIVVM
HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
MAIILFFDWIVGDTRISRSKAKKMN
HHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MEQKNTFTFSTPLIWVLFALLGFALLPSKALDYGLWDSTSDEMLEAMGWYNLNLSWSWFL
CCCCCCEEECCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCEECCCCHHHHH
AVLIFPVLSLIFPKESTKRAKIELALIAAIFLFVFISATVAKFSLGYSVIILMVALLALA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNALAQLKVMQGDKFVIASLIAIVMTIFFFIVYPTFAILLSMFFDNGEFKPQQVAEIIQQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
PYVIRVVGNSLAVSSVVGVLSTIFGLAFALYTTRIAKRTAFIGKIFSILPIVTPPFVVGL
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GVTLMLGRSGYVTAFLVEYLGFSSNWLYGFTGIVIAHTLALTPMSFMILEGALKSIHPSI
HHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EEAAYTLRSNRYQAFFHIIFPLLKPALANSFLVVVIQSLADFSTPLVLGGSFDVIATQIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
FYIAGSQLDYASASTLGTILLMFSLAIFVIQYLWIGKRSYVTVSGKSYRGDVQELPNGLK
HEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCHHH
GIIVFFLGFWTLFNLVLYGSIFYGSFTVNWGVDYTLTLKNYQILFGQGFSDGAWPSLIQT
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECEEEEEECCCCCCCCHHHHHH
VIFAASAAPVTALFGLLIAYITVRREFKGKKTLEFLTLLCFAVPGTVAGVSYIIAFNSSP
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCCC
IYLTGTAMIIILSMVMRNMPVGMRAAIAGLGQLDKSLDEASLSLKGSSFKTIWYIVFPLL
EEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH
KPALLSALVTSFVRSMTTVSAIIFLVTADTRVATSYILNRVEDGEYGIAIAYGSILIVVM
HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
MAIILFFDWIVGDTRISRSKAKKMN
HHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8807793 [H]