| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is afuA_2
Identifier: 15602819
GI number: 15602819
Start: 1125304
End: 1126326
Strand: Direct
Name: afuA_2
Synonym: PM0954
Alternate gene names: NA
Gene position: 1125304-1126326 (Clockwise)
Preceding gene: 15602818
Following gene: 15602820
Centisome position: 49.85
GC content: 41.35
Gene sequence:
>1023_bases ATGAAAAAAACACATCTTGCCCTATTTGGCATGTTAGTGGCAGGTTTAACTGCCACTAATGTGGCAAAGGGCGAAGGCAG ATTAGTCGTTTACTGCAGTGCACAAAATGTTGTTTGTGAAAAAGCAGTACAAGGTTTTGCAAAAAAATATGATGTCAAAA CCTCTTTTATCCGTAATAGCTCGGGCAGTACCCTAGCGAAAATCGATGCAGAAAAAAATAACCCGCAGGCTGACGTTTGG TATGGTGGACCTTTTGATACTCACTTACAAGCGGCTGAACTCGGTTTATTAAGTCCTTATCCATTCCCTAAACTCAGTGA AGTGATGCCACAATTCCAAAAATTAGGTGATGGCAAAAGCTCCATTGTCTATATGGGGGTACTCGGTTTTGGGGTCAATA CGGAACGTTTGAAAAAGTTAGGGATCAAGGACGTGCCAAAATGCTGGAAAGATTTAGCTGATCCTCGTTTTAAAAATGAA ATTCAAATGGCTGACCCACAAAGTTCAGGTACAGCATATACGGCTATTGCCACGTTCGTGCAACTTTGGGGAGAAGAACA AGCATTTGATTATTTAAAACAACTTGATCAGCATATTTCACAATATCCAAAAGCAGGGACCGCACCGTCACGCAATACGG CGCGCGGTGAAACCACTGTTGGCATCGGCTTCCTACAAAACTATTCTTTTGAAAAAGAAAATGGTGCGCCAATCGAATTG GTTGTACCTTGTGAAGGGACAGGGTATGAATTGGGTGGCATCAGTGTGATTAAAGATGCGCGTAACTTAAAAAATGCGCA GCTCTTTGCTGATTGGGTTATGTCAAAAGAAGCACAGGAACTGTCTTGGAAGGAAGCGCAATCACACCATGTACCAACTA ACATTCACGCCGAACCGTCACCTTATGCGCTTAAGCCAAGTGAATTGAACTTAATTAATTATGACTTTGATAAATTTGGT TCAAATGAAATGCGTAGTCACCTCATCGGAAAATGGGTTGATAAAATCAAACTCAATAAATAG
Upstream 100 bases:
>100_bases TTGAAAAATACGGTGCCGCGGATGAACGTAAACGCTTGATTGGTAAATGGGTAGATAGTATCAAATTATCCAAATAGTGA GACAAAAAAGAGGGCAAACC
Downstream 100 bases:
>100_bases TCAGGAGTCAGCATGAAAACATTAAAAATCTCTGCCATTTCCACCGCACTTTTACTCAGTGGCGGATTGCTCTCCTCTCT CGCTTTCGCAGAAGGGCGAT
Product: AfuA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKKTHLALFGMLVAGLTATNVAKGEGRLVVYCSAQNVVCEKAVQGFAKKYDVKTSFIRNSSGSTLAKIDAEKNNPQADVW YGGPFDTHLQAAELGLLSPYPFPKLSEVMPQFQKLGDGKSSIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNE IQMADPQSSGTAYTAIATFVQLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQNYSFEKENGAPIEL VVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQELSWKEAQSHHVPTNIHAEPSPYALKPSELNLINYDFDKFG SNEMRSHLIGKWVDKIKLNK
Sequences:
>Translated_340_residues MKKTHLALFGMLVAGLTATNVAKGEGRLVVYCSAQNVVCEKAVQGFAKKYDVKTSFIRNSSGSTLAKIDAEKNNPQADVW YGGPFDTHLQAAELGLLSPYPFPKLSEVMPQFQKLGDGKSSIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNE IQMADPQSSGTAYTAIATFVQLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQNYSFEKENGAPIEL VVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQELSWKEAQSHHVPTNIHAEPSPYALKPSELNLINYDFDKFG SNEMRSHLIGKWVDKIKLNK >Mature_340_residues MKKTHLALFGMLVAGLTATNVAKGEGRLVVYCSAQNVVCEKAVQGFAKKYDVKTSFIRNSSGSTLAKIDAEKNNPQADVW YGGPFDTHLQAAELGLLSPYPFPKLSEVMPQFQKLGDGKSSIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNE IQMADPQSSGTAYTAIATFVQLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQNYSFEKENGAPIEL VVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQELSWKEAQSHHVPTNIHAEPSPYALKPSELNLINYDFDKFG SNEMRSHLIGKWVDKIKLNK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37602; Mature: 37602
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTHLALFGMLVAGLTATNVAKGEGRLVVYCSAQNVVCEKAVQGFAKKYDVKTSFIRNS CCCHHHHHHHHHHHHHHHHCEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCC SGSTLAKIDAEKNNPQADVWYGGPFDTHLQAAELGLLSPYPFPKLSEVMPQFQKLGDGKS CCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC SIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNEIQMADPQSSGTAYTAIATFV CEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHH QLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQNYSFEKENGAPIEL HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCEEE VVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQELSWKEAQSHHVPTNIHAEPS EEECCCCCEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC PYALKPSELNLINYDFDKFGSNEMRSHLIGKWVDKIKLNK CCEECCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKTHLALFGMLVAGLTATNVAKGEGRLVVYCSAQNVVCEKAVQGFAKKYDVKTSFIRNS CCCHHHHHHHHHHHHHHHHCEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCC SGSTLAKIDAEKNNPQADVWYGGPFDTHLQAAELGLLSPYPFPKLSEVMPQFQKLGDGKS CCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC SIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNEIQMADPQSSGTAYTAIATFV CEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHH QLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQNYSFEKENGAPIEL HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCEEE VVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQELSWKEAQSHHVPTNIHAEPS EEECCCCCEECCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC PYALKPSELNLINYDFDKFGSNEMRSHLIGKWVDKIKLNK CCEECCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]