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The map label for this gene is rimP [H]

Identifier: 15602626

GI number: 15602626

Start: 897492

End: 898025

Strand: Reverse

Name: rimP [H]

Synonym: PM0761

Alternate gene names: 15602626

Gene position: 898025-897492 (Counterclockwise)

Preceding gene: 15602627

Following gene: 15602625

Centisome position: 39.78

GC content: 38.58

Gene sequence:

>534_bases
ATGTTGGCGATATTGCCTATCAATAACGTTATCCTAAGACAGATGTGTTTAAGTATCCTACATATTAGAGAGGTAATTTT
GGCAACCTTAGAACAAAAGTTACAAGAACTGCTACAGAGCTCAGTCGAAGATTTAGGGTGTGAGCTTTGGGGCATTGAAT
GTCAGCGTGCTGGTCGCTATTTAACAGTACGTTTATATATAGATAAAGAAGGTGGCGTCACAGTGGAAGATTGTGCCGAT
GTGAGCCGTCAAGTGAGCGCGATTTTAGATGTGGAAGATCCGATTGCGGATAAATATAACCTTGAAGTGTCTTCACCTGG
TTTAGATCGTGCATTATTCACATTAGATCAATATCAGCGCTATATTGGACAAGAAATTGTGGTGCATTTGCGCATTCCTG
TTTTGGATCGTCGTAAATGGCAAGGTAAATTAGAAAAAATTGAGAATGATATGTTGACCCTGATTGTCGATGGGCAAGAA
CAAATTTTGGTATTTGGCAATATTCAAAAGGCCAATATTATTCCTAAATTCTAA

Upstream 100 bases:

>100_bases
AAATTATGGGGTTTTTTCGTATCTGAATGAGGAATTTTTATGTAAGGACTGAACATGCGAGTCCTTTTTTTACGTCTAAA
ATTTATGGTTGATTTATTGG

Downstream 100 bases:

>100_bases
AAGGAGCAAACAGAGCAATGAGTAAAGAACTTTTATTGGCTGCAGAAGCGGTATCAAATGAAAAATTATTACCACGTGAA
AAGATTTTTGAAGCGTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLAILPINNVILRQMCLSILHIREVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDKEGGVTVEDCAD
VSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIENDMLTLIVDGQE
QILVFGNIQKANIIPKF

Sequences:

>Translated_177_residues
MLAILPINNVILRQMCLSILHIREVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDKEGGVTVEDCAD
VSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIENDMLTLIVDGQE
QILVFGNIQKANIIPKF
>Mature_177_residues
MLAILPINNVILRQMCLSILHIREVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRYLTVRLYIDKEGGVTVEDCAD
VSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQRYIGQEIVVHLRIPVLDRRKWQGKLEKIENDMLTLIVDGQE
QILVFGNIQKANIIPKF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=55.6291390728477, Blast_Score=183, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 20217; Mature: 20217

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAILPINNVILRQMCLSILHIREVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRY
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEHHCCCCE
LTVRLYIDKEGGVTVEDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQR
EEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
YIGQEIVVHLRIPVLDRRKWQGKLEKIENDMLTLIVDGQEQILVFGNIQKANIIPKF
HHHHHEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCEECCCCCCC
>Mature Secondary Structure
MLAILPINNVILRQMCLSILHIREVILATLEQKLQELLQSSVEDLGCELWGIECQRAGRY
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEHHCCCCE
LTVRLYIDKEGGVTVEDCADVSRQVSAILDVEDPIADKYNLEVSSPGLDRALFTLDQYQR
EEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
YIGQEIVVHLRIPVLDRRKWQGKLEKIENDMLTLIVDGQEQILVFGNIQKANIIPKF
HHHHHEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]